Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_018088.1
Length=104936
Score E
Sequences producing significant alignments: (Bits) Value
seq145875 206 2e-48
>seq145875
Length=1531
Score = 206 bits (228), Expect = 2e-48
Identities = 551/830 (66%), Gaps = 24/830 (3%)
Strand=Plus/Plus
Query 71932 GCATTCAATCTTGGTGCCATTAAAGATTTAGGTCGTATGGAAAAATTATCCGAATTAGTT 71991
||||| |||||||||| ||| || | | | | | | ||| ||||| | || || | |
Sbjct 4 GCATTTAATCTTGGTGAAATTGAATCTCTTGATGATTTTGAAGAATTAGCTGATTTGGCT 63
Query 71992 ATTAGAGCATTAGATGCTTTACTTGATTACCAAGATTATCCAATACTAGCTGCT-GAAAA 72050
| | ||| | ||| | |||| ||||| |||||||| ||||| | || || ||| |
Sbjct 64 GTACGTGCACTTGATTCACTACTGGATTATCAAGATTACCCAATTCCTGCGGCAAGAACA 123
Query 72051 TGCTACCAAGCGAA--GACGTACTTTAGGTGTTGGCATTATTAATTATGCTCATCACTTA 72108
| | ||| ||| | || || || || | || | || ||||| || | | |
Sbjct 124 TCAT--CAAT-GAACCGTCGAACATTGGGGATCGGTGTCATCAATTACGCATACTATCTT 180
Query 72109 GCTAAAAATGGTGTTAAATATTCTGATGGCAGTGCCAACAATTTAACTCAT-GAACTCTT 72167
||||| |||| ||||||||||||||||| ||||| || || ||||| ||| |||| ||
Sbjct 181 GCTAAGCATGGCGTTAAATATTCTGATGGAAGTGCTAATAACTTAACGCATAGAACATTT 240
Query 72168 CGAAAGTTTTCAGTATTACCTATTGAAAGCAAGTTGTGATTTAGCCAAAGAACAAGGCGC 72227
||| | || ||||| | | ||||| | | || ||||| |||| ||
Sbjct 241 -GAAGCAATGCAATATTATTTGCTCAAAGCTTCAAACAACCTTGCTAAAGAGAAAGGGGC 299
Query 72228 TTGTCCTGCATTCCATGAGACAACTTATTCACAGGGTATATTACCTATTGACCGCTATAA 72287
|||||| ||| |||| ||||| || ||||| ||||| || || |||||| |||||
Sbjct 300 ATGTCCTTTATTTAATGAAACAACCTACTCACAAGGTATTTTGCCGATTGACACTTATAA 359
Query 72288 TAAGTCAGTAGATGGTATTCATAGTGAAGAGTTACATC-TTCCG--TGGGAGCAATTGAG 72344
||| |||| | | | || ||||| || | || | ||||| ||| |
Sbjct 360 GAAGGAGTTAGACGCTTTAACTA---AAGAGCCACTCCATTATGAATGGGATGCTTTGCG 416
Query 72345 AGAAGATATTTTGAAATACGGTTTACGTAATTCTACTGTATCCTCATTGATGCCAAGTGA 72404
|||| ||| ||||||||||||||||| |||||| |||| | | ||||| ||
Sbjct 417 AGAATCAATTAAAAAATACGGTTTACGTAACTCTACTTTATCTGCGCTCATGCCGTCGGA 476
Query 72405 AACAAGTTCTCAGGTATCTAATGCAACAAATGGTATTGAACCACCTCGCGGTTTAATGAG 72464
||| ||| || | |||||||| || ||||| || ||||| ||||| |||| | ||
Sbjct 477 AACGTCTTCACAAATTTCTAATGCGACTAATGGAATCGAACCGCCTCGAGGTTATGTCAG 536
Query 72465 CATTAAAGCAAGTAAAGATGGTATCTTGAAGCAAGTAGTACCTCATATTGGTACAATG-G 72523
| | |||||| |||||||| || || ||||| || ||| || || ||| |
Sbjct 537 CGTAAAAGCATCGAAAGATGGCATTTTACGTCAAGTTGTTCCTGAT-----TATCATGAG 591
Query 72524 CT----AATGACTATGAATTGTTGTGGAATATTCCAAGCAATAATGGCTATATTGAATTA 72579
|| ||| ||| ||||| || ||| | ||||| | ||| | || || | || |
Sbjct 592 CTTAAAAATTTCTACGAATTATTATGGCAAATTCCTAATAATCACGGGTACTTGCAACTT 651
Query 72580 GTTGCAATCATGCAAAAGTTTGTCGATCAGGCAATCTCTGCGAACACAAATTATGACCCT 72639
|||| |||||||| || ||| | ||||| | || || || || || ||||| || ||
Sbjct 652 GTTGGTATCATGCAGAAATTTATTGATCAATCGATTTCAGCCAATACTAATTACGATCCA 711
Query 72640 ACTAAATTCGCAAATGGCAAAGTCCCAGTTAAGCAAATTCTTAAAGATTTAATACGAGGC 72699
|| ||||| | |||| ||||| || | || || | ||| ||| ||| | ||
Sbjct 712 ACAAAATTTACCAATGATAAAGTACCTATGAAACAGTTACTTGCAGACTTACTTACAGCT 771
Query 72700 TATAAGCTTGGTGTTAAAACATTCTATTACCATAACACCCGTGATGGTGC 72749
||||| || | ||||| | ||||| ||||| || || ||||||||
Sbjct 772 TATAAATACGGCATAAAAACGCTTTATTATCATAATACTCGAGATGGTGC 821
Score = 111 bits (122), Expect = 1e-19
Identities = 258/384 (67%), Gaps = 10/384 (3%)
Strand=Plus/Plus
Query 72941 TTTGAAAAATTAATAGAAAAACAATTGAGCTTCTTTTGGCGACCTGATGAAATAGATGTA 73000
||||||||| |||| ||||| || || || |||||||| || || ||| | ||| |
Sbjct 1081 TTTGAAAAACTAATTGAAAAGCAGTTATCTTTTTTTTGGCGGCCAGAAGAAGTGGATATT 1140
Query 73001 TCAAAAGACCGTTCTGATTGGCAAAAAATGACTGACTCTGAAAAGCATATTTTCATATCA 73060
||| |||| || |||| | | |||| |||||| |||||||| |||||
Sbjct 1141 TCACAAGATCGAATCGATTATGCTGGACTTCCTGAACATGAAAAACATATTTT--TATCA 1198
Query 73061 A-ATCTTAAA-TACCAAACATTGCTTGATAGCATGGCTGCACGTTCTGTTAATATGGTAT 73118
| |||||| || ||||| || || ||| || | ||| | ||| | | ||
Sbjct 1199 GTAACTTAAAATATCAAACTTTACTGGATTCGATTCAAGGACGCAGTCCGAATGTCGCAT 1258
Query 73119 TACTTCCACTTGTATCTTTACCTGAAGTTGAAACATGGATTGAAACATGGGCATTTAGTG 73178
| || || | | || ||||||| ||||||| ||| ||||||| ||| ||||| |
Sbjct 1259 TGCTCCCTTTAATTTCAATACCTGAGCTTGAAACTTGGGTTGAAACGTGGTCATTTTCAG 1318
Query 73179 AAACTATTCACTCTCGCTCATATACTCATATCTTGCGTAACCTTTTCGTAGATCCAAGTG 73238
||||||| ||||| || || ||||| ||||| | |||||| | || ||||||
Sbjct 1319 AAACTATCCACTCGCGATCTTATACCCATATTATTCGTAACATCGTCAATGATCCATCGA 1378
Query 73239 AAGTATTTGATGATATT---ACAATTAACCCTGAAATATTAAAACGTGCTGAAAGTATCG 73295
|| |||||||||||| |||| || | ||||| ||||||||| | | ||||
Sbjct 1379 TTGTCTTTGATGATATTGTGACAAATA---CCGAAATTCAAAAACGTGCAGGAGACATCG 1435
Query 73296 CCAAATACTTTGATGATGTGATAC 73319
| || | |||||| ||||||
Sbjct 1436 CTGGCTATTATGATGACTTGATAC 1459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 335072314649332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |