Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_018088.1 Length=104936 Score E Sequences producing significant alignments: (Bits) Value seq145875 206 2e-48 >seq145875 Length=1531 Score = 206 bits (228), Expect = 2e-48 Identities = 551/830 (66%), Gaps = 24/830 (3%) Strand=Plus/Plus Query 71932 GCATTCAATCTTGGTGCCATTAAAGATTTAGGTCGTATGGAAAAATTATCCGAATTAGTT 71991 ||||| |||||||||| ||| || | | | | | | ||| ||||| | || || | | Sbjct 4 GCATTTAATCTTGGTGAAATTGAATCTCTTGATGATTTTGAAGAATTAGCTGATTTGGCT 63 Query 71992 ATTAGAGCATTAGATGCTTTACTTGATTACCAAGATTATCCAATACTAGCTGCT-GAAAA 72050 | | ||| | ||| | |||| ||||| |||||||| ||||| | || || ||| | Sbjct 64 GTACGTGCACTTGATTCACTACTGGATTATCAAGATTACCCAATTCCTGCGGCAAGAACA 123 Query 72051 TGCTACCAAGCGAA--GACGTACTTTAGGTGTTGGCATTATTAATTATGCTCATCACTTA 72108 | | ||| ||| | || || || || | || | || ||||| || | | | Sbjct 124 TCAT--CAAT-GAACCGTCGAACATTGGGGATCGGTGTCATCAATTACGCATACTATCTT 180 Query 72109 GCTAAAAATGGTGTTAAATATTCTGATGGCAGTGCCAACAATTTAACTCAT-GAACTCTT 72167 ||||| |||| ||||||||||||||||| ||||| || || ||||| ||| |||| || Sbjct 181 GCTAAGCATGGCGTTAAATATTCTGATGGAAGTGCTAATAACTTAACGCATAGAACATTT 240 Query 72168 CGAAAGTTTTCAGTATTACCTATTGAAAGCAAGTTGTGATTTAGCCAAAGAACAAGGCGC 72227 ||| | || ||||| | | ||||| | | || ||||| |||| || Sbjct 241 -GAAGCAATGCAATATTATTTGCTCAAAGCTTCAAACAACCTTGCTAAAGAGAAAGGGGC 299 Query 72228 TTGTCCTGCATTCCATGAGACAACTTATTCACAGGGTATATTACCTATTGACCGCTATAA 72287 |||||| ||| |||| ||||| || ||||| ||||| || || |||||| ||||| Sbjct 300 ATGTCCTTTATTTAATGAAACAACCTACTCACAAGGTATTTTGCCGATTGACACTTATAA 359 Query 72288 TAAGTCAGTAGATGGTATTCATAGTGAAGAGTTACATC-TTCCG--TGGGAGCAATTGAG 72344 ||| |||| | | | || ||||| || | || | ||||| ||| | Sbjct 360 GAAGGAGTTAGACGCTTTAACTA---AAGAGCCACTCCATTATGAATGGGATGCTTTGCG 416 Query 72345 AGAAGATATTTTGAAATACGGTTTACGTAATTCTACTGTATCCTCATTGATGCCAAGTGA 72404 |||| ||| ||||||||||||||||| |||||| |||| | | ||||| || Sbjct 417 AGAATCAATTAAAAAATACGGTTTACGTAACTCTACTTTATCTGCGCTCATGCCGTCGGA 476 Query 72405 AACAAGTTCTCAGGTATCTAATGCAACAAATGGTATTGAACCACCTCGCGGTTTAATGAG 72464 ||| ||| || | |||||||| || ||||| || ||||| ||||| |||| | || Sbjct 477 AACGTCTTCACAAATTTCTAATGCGACTAATGGAATCGAACCGCCTCGAGGTTATGTCAG 536 Query 72465 CATTAAAGCAAGTAAAGATGGTATCTTGAAGCAAGTAGTACCTCATATTGGTACAATG-G 72523 | | |||||| |||||||| || || ||||| || ||| || || ||| | Sbjct 537 CGTAAAAGCATCGAAAGATGGCATTTTACGTCAAGTTGTTCCTGAT-----TATCATGAG 591 Query 72524 CT----AATGACTATGAATTGTTGTGGAATATTCCAAGCAATAATGGCTATATTGAATTA 72579 || ||| ||| ||||| || ||| | ||||| | ||| | || || | || | Sbjct 592 CTTAAAAATTTCTACGAATTATTATGGCAAATTCCTAATAATCACGGGTACTTGCAACTT 651 Query 72580 GTTGCAATCATGCAAAAGTTTGTCGATCAGGCAATCTCTGCGAACACAAATTATGACCCT 72639 |||| |||||||| || ||| | ||||| | || || || || || ||||| || || Sbjct 652 GTTGGTATCATGCAGAAATTTATTGATCAATCGATTTCAGCCAATACTAATTACGATCCA 711 Query 72640 ACTAAATTCGCAAATGGCAAAGTCCCAGTTAAGCAAATTCTTAAAGATTTAATACGAGGC 72699 || ||||| | |||| ||||| || | || || | ||| ||| ||| | || Sbjct 712 ACAAAATTTACCAATGATAAAGTACCTATGAAACAGTTACTTGCAGACTTACTTACAGCT 771 Query 72700 TATAAGCTTGGTGTTAAAACATTCTATTACCATAACACCCGTGATGGTGC 72749 ||||| || | ||||| | ||||| ||||| || || |||||||| Sbjct 772 TATAAATACGGCATAAAAACGCTTTATTATCATAATACTCGAGATGGTGC 821 Score = 111 bits (122), Expect = 1e-19 Identities = 258/384 (67%), Gaps = 10/384 (3%) Strand=Plus/Plus Query 72941 TTTGAAAAATTAATAGAAAAACAATTGAGCTTCTTTTGGCGACCTGATGAAATAGATGTA 73000 ||||||||| |||| ||||| || || || |||||||| || || ||| | ||| | Sbjct 1081 TTTGAAAAACTAATTGAAAAGCAGTTATCTTTTTTTTGGCGGCCAGAAGAAGTGGATATT 1140 Query 73001 TCAAAAGACCGTTCTGATTGGCAAAAAATGACTGACTCTGAAAAGCATATTTTCATATCA 73060 ||| |||| || |||| | | |||| |||||| |||||||| ||||| Sbjct 1141 TCACAAGATCGAATCGATTATGCTGGACTTCCTGAACATGAAAAACATATTTT--TATCA 1198 Query 73061 A-ATCTTAAA-TACCAAACATTGCTTGATAGCATGGCTGCACGTTCTGTTAATATGGTAT 73118 | |||||| || ||||| || || ||| || | ||| | ||| | | || Sbjct 1199 GTAACTTAAAATATCAAACTTTACTGGATTCGATTCAAGGACGCAGTCCGAATGTCGCAT 1258 Query 73119 TACTTCCACTTGTATCTTTACCTGAAGTTGAAACATGGATTGAAACATGGGCATTTAGTG 73178 | || || | | || ||||||| ||||||| ||| ||||||| ||| ||||| | Sbjct 1259 TGCTCCCTTTAATTTCAATACCTGAGCTTGAAACTTGGGTTGAAACGTGGTCATTTTCAG 1318 Query 73179 AAACTATTCACTCTCGCTCATATACTCATATCTTGCGTAACCTTTTCGTAGATCCAAGTG 73238 ||||||| ||||| || || ||||| ||||| | |||||| | || |||||| Sbjct 1319 AAACTATCCACTCGCGATCTTATACCCATATTATTCGTAACATCGTCAATGATCCATCGA 1378 Query 73239 AAGTATTTGATGATATT---ACAATTAACCCTGAAATATTAAAACGTGCTGAAAGTATCG 73295 || |||||||||||| |||| || | ||||| ||||||||| | | |||| Sbjct 1379 TTGTCTTTGATGATATTGTGACAAATA---CCGAAATTCAAAAACGTGCAGGAGACATCG 1435 Query 73296 CCAAATACTTTGATGATGTGATAC 73319 | || | |||||| |||||| Sbjct 1436 CTGGCTATTATGATGACTTGATAC 1459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335072314649332