Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq79726 187 5e-42 seq25219 102 2e-16 >seq79726 Length=8148 Score = 187 bits (206), Expect = 5e-42 Identities = 799/1245 (64%), Gaps = 56/1245 (4%) Strand=Plus/Plus Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960 ||||| | ||||| || ||||| || || || || || | ||| | ||| | ||| || Sbjct 4146 AGGTGTTGATTGACGATTTGGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGAT 4205 Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||||| ||||| | |||||||| || || || || || || ||||| ||||| Sbjct 4206 GTGTACGGCTCAAACGATTCGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATT 4265 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCC 213080 ||||| | |||||| |||||| || ||||||| | || | || | ||| Sbjct 4266 GGAGCAATCAGGAGCGAGTTCCTAACACCGTGCTTAGCAATTTTCTCCTTCAGAGCAGCC 4325 Query 213081 CAGTCCCATCTGCCAGA-CAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGAT 213139 || ||||| |||| ||| | | ||||| |||||||||||| |||| | || Sbjct 4326 CAATCCCA-----CAGATCAGTTGGT--TCCTT---GTTCCACATGTCGTACTGAAGTAT 4375 Query 213140 GCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTC 213199 || || || ||||| | |||| || | ||| || ||| ||| || |||||| || Sbjct 4376 TCCCTTACTAACGGGACAACCCTCATAGGTTTCGTATGGTCCAAGCTTCTCGGCCAGTTC 4435 Query 213200 GCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGC----- 213254 ||| |||| || || | |||||||||||||| || || | |||||| Sbjct 4436 ACAGCTTGCCTCTAGTGCTCCATAGTAGATGGTTTCGAAGATTTGTTGGTTGAGAAGTTG 4495 Query 213255 ---TTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 || || || ||| | | | || |||||| ||| || | || || | Sbjct 4496 CGATTGTTCGC-TCTCGT-ATGGATAGCGCATCAGAATGAGTGCG------TCGGCGAAT 4547 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAG 213371 || || || ||||| ||||| || | ||||| ||| || || ||| || Sbjct 4548 CCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTGTTTGATTTCTTCGCCTCTGGCATT 4607 Query 213372 GGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGG 213431 ||||| || ||| ||| || || ||||| | ||||||||| | | || ||||| || Sbjct 4608 GGGTAGAAATTGACGTCAATTATTTTGTTCAAGTTGCGGGTCACAATCTTTGTGACTTGC 4667 Query 213432 GCCAGGTACTCGTGATTGAACA-CGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGAT 213490 || | || | || | || | || | || | ||| |||| || || Sbjct 4668 TTCAACTTCTGGAAATCGTACTTCTTATCGGGAGTGACGAACATGTTCAGC----GCAAT 4723 Query 213491 GCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCA 213550 | |||| ||||||||| || | ||| | | | | |||||| | ||||| ||||| Sbjct 4724 GGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCGGAGTACTCGACAATCTCAGTGCA 4783 Query 213551 CAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATC 213610 || || ||||| ||||||||| | |||||| || || ||||| |||| || ||| Sbjct 4784 AAGATTACTGCACTTGATGGTGCCGATGTTCTGTTGATTGGACTTGCGGTTGCAAGCATC 4843 Query 213611 CTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAG 213668 |||||||||||||| || | |||||||| | || || | | || ||| ||| Sbjct 4844 TTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTGAGATTCTATAAT--GGCAAACCAA 4901 Query 213669 AG-GTACCTGGCCTTGACCACCCGCCTGACAGC---TCCGGGCGTAGCCTCGTACTGTTC 213724 || || || ||| ||| ||| || ||| | | |||||| | Sbjct 4902 AGCGTTTGTG--CTTT--CACAGTTCTGTTTGCCTTTCCCTCCTT---CTCGTAACGGGT 4954 Query 213725 GTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG-ATGCGGGAC 213783 ||| ||||| | ||| | | |||||||| | || || || || ||| ||| | Sbjct 4955 GTACAGCTCCTCGAACTTCTCCCCCCAGACTTCATGCAAACCGGGGCACTTATGTGGG-C 5013 Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843 |||| | |||||| ||||| || |||| || ||||||||| || || | ||| | Sbjct 5014 ACATCAAAGACCAGTCGCCGTCGGCTTCCACTCGCTTCATGAACAGATCGGGAATCCATA 5073 Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903 | || ||||| || | | || |||| ||| ||| | ||| || || ||| | Sbjct 5074 GAGCATAGAACAAATCGCGAGCTCTGTTCTCCTCCTTTCCGGTGTTCTTCTTCAAATCCA 5133 Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963 || ||||||||||||| ||||| ||||||| ||| ||||| ||||| || || | || Sbjct 5134 AGAACTCAAAGATGTCCGAATGCCAGGGCTCCAAGTAAATGGCGAAGGCACCTGGTCGCT 5193 Query 213964 TGCCG---CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020 ||||| || ||||| || || || || ||||||| | ||| | || || | Sbjct 5194 TGCCGCCTCCTTGGTCGACATACCGAGCGACGTTGTTGAACCCTCTCAGCATTGGAACAA 5253 Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG--TTGCT 214078 | ||||| || ||||| ||||| || ||| | || |||||| | | ||| Sbjct 5254 GGCCGTTTGAGGTACCGTTTGTTCCAGCAATACCGGTTCCCTTGGCCCTAATGCAGTGCA 5313 Query 214079 CATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123 ||| || || ||||| || || |||| || ||||||||||| Sbjct 5314 CAT--TGATGCCAATGCCTCCCGCAGACTTTGATATCATGGCGCA 5356 >seq25219 Length=1370 Score = 102 bits (112), Expect = 2e-16 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || || ||||| | || | || ||||| || || ||| |||||||||| ||| Sbjct 393 CAAGCGAAGTCGCAATGGAGTCCCTCGTCGCGTGAAATCAGCTCGTTGGAGAATGTAAGA 334 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||||| || | || || |||||||| |||| ||||| ||| |||||| Sbjct 333 CCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGATGCGAAGCTGCCGCTGAAGAAA 274 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || || || ||||| || || || ||| | || ||||| ||| |||| |||| Sbjct 273 ATCCCTTCAACTGCAGCAAATGCAATGATACGTTCACCGAAGTTTGCGGACTTGCTTGAG 214 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| | ||| |||||||| ||||||||||| | ||||| Sbjct 213 ATCCATGCAAGTGCCCAGTCAGCCTTCTTCTTCACACATGG 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929830470384640