Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_019526.1
Length=345809
Score E
Sequences producing significant alignments: (Bits) Value
seq145105 95.1 3e-14
seq145812 89.7 1e-12
>seq145105
Length=1104
Score = 95.1 bits (104), Expect = 3e-14
Identities = 252/381 (66%), Gaps = 18/381 (5%)
Strand=Plus/Plus
Query 48365 TGGTGATGCAGGAGTCGGTAAAACTCAGATCGTCGATGGTTTTGCACAAGCCATTGCTGA 48424
|||||| | || || ||||||||| ||| ||||| || |||| || |||| |
Sbjct 699 TGGTGAACCGGGTGTTGGTAAAACTGCGATTGTCGAAGGACTTGCTCAGCGAATTGTAAA 758
Query 48425 TGGTGACGTACCTGACTATCTGAAAGGTGTTGAG---GTATTATCTCTTAACGTTTCTGC 48481
||| || || ||||| ||| | || | | || ||||| || || | ||
Sbjct 759 TGGCGAAGTGCCTGAAGGTCT---ACGTAATAAACGAGTTTTATCACTCGACATGGGCGC 815
Query 48482 TGTAACTGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAA 48541
| | ||||||| | |||||||| |||||||||||||||||| | ||| || ||||
Sbjct 816 ACTTATTGCTGGTGCTAAATACCGGGGTGAATTCGAAGAACGTTTAAAAGCGGTTCTTAA 875
Query 48542 AGAACTT---AAAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGAT 48598
||| ||| ||| || || | || || || || ||||| ||| | |||| ||| |
Sbjct 876 AGATCTTTCAAAAGAAGAAGGACGCGTCATCTTATTTATTGACGAAATTCATACCATGGT 935
Query 48599 GGGTGCTGGTGGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACT 48658
||||| || | | ||| | |||||| | | || || |||||||||| ||
Sbjct 936 TGGTGC---GGGCAAAGGTGATGGTGCAATGGATGCGGGTAACATGTTGAAACCTGCTCT 992
Query 48659 TTCACGTGGTGATATTC---GTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAA 48715
| | | ||||| ||| ||||| |||||||| || ||| ||||| |||||
Sbjct 993 TGCGAGAGGTGAACTTCACTGTGTT---GGTGCAACTACACTTGATGAATACCGCCAATT 1049
Query 48716 CATTGAAAAAGATGCTGCATT 48736
|| || |||||||| || ||
Sbjct 1050 TATAGAGAAAGATGCCGCTTT 1070
>seq145812
Length=1452
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 178303 GTCCCCTTAGTTCAGTTGGATAGAACAACTGCCTTCTAAGCAGTAGGTCACTGGTTCGAG 178362
||| |||||| |||| |||||||| |||| ||||||||||| ||||||||| |||||||
Sbjct 78 GTCTCCTTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAA 19
Query 178363 TCCAGTAGGGGA 178374
||| ||||||||
Sbjct 18 TCCTGTAGGGGA 7
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1104385054160352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |