Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_020080.1 Length=174413 Score E Sequences producing significant alignments: (Bits) Value seq145875 116 4e-21 >seq145875 Length=1531 Score = 116 bits (128), Expect = 4e-21 Identities = 246/364 (68%), Gaps = 6/364 (2%) Strand=Plus/Plus Query 42174 AACAACCTATGTTTTTTGGTGAAGATACTGGTGTTGCACGTTATGAATCGCAGAAACACA 42233 || |||| |||||| |||| || | |||||| |||||||| || ||| | Sbjct 1016 AAGAACCGATGTTTCTTGGACAATCGGTTAATGTTGCGCGTTATGATCAACAAAAATATG 1075 Query 42234 AAGTTTTCGAAAGCCTGACGCAAAAACAGCTTTCTTTCTTCTGGCGTCCGGAAGAAGTCG 42293 || |||| |||| || | |||| ||| | ||||| || ||||| || |||||||| | Sbjct 1076 AAATTTTTGAAAAACTAATTGAAAAGCAGTTATCTTTTTTTTGGCGGCCAGAAGAAGTGG 1135 Query 42294 ATCTGTCTACTGACCGTATGCAGTATGCAAAACTTCCTGAACATGAAAAAATCATTTTCG 42353 || | || || || || | ||||| ||||||||||||||||||| ||||| Sbjct 1136 ATATTTCACAAGATCGAATCGATTATGCTGGACTTCCTGAACATGAAAAACATATTTTTA 1195 Query 42354 ATTCTAACCTACAGTATCAAACCCTGTTAGATACCATTCAGGGACGTGGGCCTAACCTCG 42413 |||| || | |||||||| | | ||| | ||||| ||||| | || || ||| Sbjct 1196 TCAGTAACTTAAAATATCAAACTTTACTGGATTCGATTCAAGGACGCAGTCCGAATGTCG 1255 Query 42414 CATTTTTGCC---AATTGCATCCGATGTGAGCATGGAAACCTGGATCGAAACGTGGGCGT 42470 |||| | || |||| || | ||||| | ||||| ||| | ||||||||| | | Sbjct 1256 CATTGCTCCCTTTAATTTCA--ATACCTGAGC-TTGAAACTTGGGTTGAAACGTGGTCAT 1312 Query 42471 TTAGTGAAACCATCCACAGCCGTAGTTACACGCATATTCAACGTAACTTGCACATTGATC 42530 || ||||| |||||| || ||| || |||||| |||||| | || ||||| Sbjct 1313 TTTCAGAAACTATCCACTCGCGATCTTATACCCATATTATTCGTAACATCGTCAATGATC 1372 Query 42531 CTTC 42534 | || Sbjct 1373 CATC 1376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556973894595680