Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq336 300 1e-75 seq119161 138 7e-27 seq145784 102 5e-16 seq52615 100 2e-15 seq117123 98.7 6e-15 seq145858 95.1 8e-14 seq59601 93.3 3e-13 seq145091 86.0 4e-11 >seq336 Length=4635 Score = 300 bits (332), Expect = 1e-75 Identities = 401/549 (73%), Gaps = 10/549 (2%) Strand=Plus/Minus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 ||||||||||||| || ||||||||| ||||||| || | ||| |||| ||||| | Sbjct 1353 TTGGTATTGATTTGGGTACTACTTACTCGTGTGTAGGAGTATTCCAACATGGCAAAGTTG 1294 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 |||| |||||||| || ||||| ||| | || |||||||| ||||| | || || || | Sbjct 1293 AAATCATTGCCAACGATCAAGGAAATCGTACCACACCATCTTATGTCGCCTTCACAGATA 1234 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | || | ||||||||| ||||| ||||| |||| | ||| ||||| || |||| Sbjct 1233 CCGAGCGTCTTATTGGTGATGCCGCTAAGAATCAGGTTGCTATGAATCCAACCAACACTA 1174 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | |||||||| ||| | ||||||||||| || || || ||| || | || || || || | Sbjct 1173 TCTTTGATGCCAAACGTTTGATTGGTCGCAAATTCGAGGATGCCCCAGTGCAGTCAGACA 1114 Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAA--T 474630 || || ||||| ||| | || | | ||||| || |||||| | || ||| || | Sbjct 1113 TGAAGCACTGGCCCTTTGAAGTAGTTAGTGTTGAAGGAAAACCAAAAATTCAAGTAATCT 1054 Query 474631 ACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAA 474690 | | | | | |||| | || | ||| ||||| | || ||||| ||||| | | || Sbjct 1053 ATAAGGATGAGAAA-AAGACTTTCTTC-CCGGAGGAGATCTCTTCCATGGTCCTCACTAA 996 Query 474691 AATGAAACAAACCGC--GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTAC 474747 |||||| | ||||| |||| || || || ||||| || | |||| || || || Sbjct 995 AATGAAGGAGACCGCAGAAGCT--TACCTCGG-CAAGACTGTTTCGAATGCTGTCATCAC 939 Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807 ||||||||| ||||| ||||||||||| |||||||| || || ||||| || | ||||| Sbjct 938 TGTTCCAGCTTATTTCAATGATTCTCAGCGTCAAGCTACCAAGGATGCCGGTACTATTGC 879 Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCT 474867 || | ||||| || ||||||||||| || || ||||||||||| ||||||| ||| | Sbjct 878 TGGATTGAATGTATTGCGTATTATTAACGAGCCCACAGCAGCCGCTATTGCTTACGGTTT 819 Query 474868 TGATAAGAA 474876 || ||||| Sbjct 818 GGACAAGAA 810 >seq119161 Length=1594 Score = 138 bits (152), Expect = 7e-27 Identities = 290/426 (68%), Gaps = 10/426 (2%) Strand=Plus/Minus Query 475798 TGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT--CAA-TC 475854 ||||||||||||||| ||||| |||||||| ||||| || ||||| ||| ||| || Sbjct 1384 TGATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCCATTTTGCACGGTGACAAGTC 1325 Query 475855 AGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGA 475914 | || || | | || || | ||| |||| || |||||| | || || ||| |||| Sbjct 1324 ---CCAGGAAGTCCAGGATCTTTTGCTTCTTGATGTCACTCCATTGTCTTTGGGTATTGA 1268 Query 475915 AACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA-- 475972 ||| | || || | |||| | | || | | ||||| | || ||| |||| Sbjct 1267 AACTGCCGGCGGTGTGATGAGCGTTTTGATCAAACGTAATACCACCATTCCAA-CAAAGC 1209 Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032 ||| | ||| ||| |||| ||||| || || ||| | ||| |||||| ||| Sbjct 1208 AAACCCAAAC-ATTCACCACCTATTCAGACAACCAACCTGGTGTGTTGATCCAAGTCTAC 1150 Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 || |||||| | | ||||| || || ||| | || | || | || || Sbjct 1149 GAGGGTGAACGTGCGATGACTAAGGACAACAACTTGTTGGGCAAATTCGAACTCTCTGGA 1090 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 |||||||| ||||| | || || ||||||||||| |||||||||||||||||||| || Sbjct 1089 ATTCCTCCAGCTCCTCGCGGTGTCCCTCAAATTGAGGTTACTTTTGATATTGATGCCAAC 1030 Query 476153 GGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAAAAATATAACTATT 476212 |||||| | ||||| |||||| || | || | |||||| || || || || || Sbjct 1029 GGTATTTTGAATGTAACTGCTCTAGAAAGGTCAACCAACAAGGAAAATAAGATTACCATC 970 Query 476213 ACAAAC 476218 |||||| Sbjct 969 ACAAAC 964 >seq145784 Length=1430 Score = 102 bits (112), Expect = 5e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 ||||||| |||| || ||||| || || || ||||| ||||||||||| || ||||||| Sbjct 176 ATGCAGTTGTTACAGTACCAGCTTACTTCAACGATTCCCAACGTCAAGCTACCAAAGATG 235 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || |||| | || | || ||||| ||| ||||||| ||||| |||||||| || Sbjct 236 CTGGTCAAATTTCGGGATTGAACGTTTTGCGTGTTATTAACGAACCCACAGCAGCTGCCT 295 Query 474855 TTGCTTATGGTCTTGATAA 474873 | || |||||| | || || Sbjct 296 TGGCCTATGGTATGGACAA 314 >seq52615 Length=2943 Score = 100 bits (110), Expect = 2e-15 Identities = 246/369 (67%), Gaps = 8/369 (2%) Strand=Plus/Minus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || |||||||| ||||| || ||||| ||||| || ||||| | | | || ||| || Sbjct 2262 AACCCTGATGAGGCTGTCGCCTATGGTGCTGCCGTACAAGCTGGAGTCCTCTCTGGTGAA 2203 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 |||| ||| | | |||||| ||| | ||||| | |||| | | | ||| || Sbjct 2202 CAAGAC-----ACTGA-TGCTATTGTCCTTTTGGACGTCAATCCATTGACGATGGGTATT 2149 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972 || || |||||||| | ||||| || ||||| | || || ||| || | |||| Sbjct 2148 GAGACGGTTGGAGGTGTCATGACCAAGCTTATACCACGCAACACAGTTATTCC-TACAAA 2090 Query 475973 AAA-TCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTT 476031 || ||| | | || || ||| ||||| || ||| ||||| || || || | | Sbjct 2089 GAAGTCACAGATTTTCTCAACTGCCTCTGACAACCAACACACTGTCACAATTCAGGTTTA 2030 Query 476032 TGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGG 476091 ||||||||| | | | || || || || || | || | || ||||| || Sbjct 2029 CGAAGGTGAACGTCCAATGACCAAGGACAACCACTTGTTGGGCAAATTCGATCTTACCGG 1970 Query 476092 TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAA 476151 || || || || || |||| |||||||||||||||| | || || || |||||||| Sbjct 1969 AATCCCACCAGCGCCACGAGGTATTCCTCAAATTGAAGTGTCGTTCGAAATCGATGCAAA 1910 Query 476152 TGGTATTCT 476160 |||||||| Sbjct 1909 CGGTATTCT 1901 Score = 96.9 bits (106), Expect = 2e-14 Identities = 115/155 (74%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 474723 AAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAA 474781 |||||| | || |||| || ||||||| || || ||||| || ||| |||| |||||| Sbjct 2940 AAGAAGGTTACACATGCCGTCGTTACTGTACCGGCCTATTTCAACGATGCTCAGCGTCAA 2881 Query 474782 GCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCA 474841 || || |||||||| || ||||| ||| | || || | | ||||||||||| || Sbjct 2880 GCTACCAAAGATGCAGGCGTTATTGCTGGTTTGAACGTGATGAGAATTATTAATGAGCCC 2821 Query 474842 ACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || |||||||| |||| || ||| | || ||||| Sbjct 2820 ACTGCAGCCGCCATTGCATACGGTTTGGACAAGAA 2786 >seq117123 Length=8748 Score = 98.7 bits (108), Expect = 6e-15 Identities = 226/333 (68%), Gaps = 12/333 (4%) Strand=Plus/Minus Query 355231 GGAACATTTGTTGAATATCCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGA 355290 |||| || || || | |||||||| || || || | ||||||||| | | ||||||| Sbjct 4003 GGAATTTTAGTCGACCAACCAGTGCCTATGCCATCGGCTCCATTAACCAGCACCATTGGA 3944 Query 355291 ATTACAGGTACA-TAAAATACTGGTTCAATCATTTTATTATCTTCAAATTGATGTTGCAA 355349 || | || ||| || | |||||||||||| | | ||| || || | || | ||| || Sbjct 3943 ATGATTGG-ACAGTACCAAACTGGTTCAATCTTCTGATTGTCATCCACTTCGTATTGTAA 3885 Query 355350 TACATCAAAATCATGTTGTATGAAAATATATTTAGTT----AATTGATTGAGTTGTGTGA 355405 | | |||| | || |||||| |||| || || | | ||||| Sbjct 3884 GAGTGGATCATCA-GCTGGATGAAA---TATTAAGCGTGCCAACGGCGACATAATTGTGA 3829 Query 355406 AGATATATCGTGCACTTGCATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCAT 355465 | ||||| || ||||| ||| ||||||| |||||| |||||||||||||||| |||||| Sbjct 3828 AAATATAACGAGCACTAGCACTATCTTTTCCTCCAGTTAATCTTGTACCAAACTGACCAC 3769 Query 355466 TGGGAAGTAATAAATTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAG 355525 || | | ||| ||||| || ||| ||| |||| ||||| || || | |||| Sbjct 3768 GTGGTTCCAGAAGATTAATGTTATTTGATCCCACAAAATTCTGTGCTATATTGACAATAG 3709 Query 355526 T-TTCAGTCATTGACTGTTCTCCATGATGATAT 355557 | | || | || |||||| ||||||||| Sbjct 3708 TCATTTGT-AGAGATACTTCTCCGTGATGATAT 3677 >seq145858 Length=1503 Score = 95.1 bits (104), Expect = 8e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 476000 GATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGAT 476059 || || ||| || ||||||||||||| | || |||||||| | ||| || ||| Sbjct 47 GACAACCAATCAGCTGTAACCATCCACGTTTTACAAGGTGAACGTAAACGTGCTGGTGAT 106 Query 476060 AATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCT 476119 ||||| | | || ||||||||||| ||||||| |||| || | || | || Sbjct 107 AATAAATCATTAGGTCAGTTTAATCTTGACGGTATTCAAGCTGCGCCACGTGGTATGCCA 166 Query 476120 CAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGT 476166 ||||| ||||| || ||||||||||||||| |||||||| | |||| Sbjct 167 CAAATCGAAGTGACCTTTGATATTGATGCAGATGGTATTTTGCATGT 213 >seq59601 Length=2262 Score = 93.3 bits (102), Expect = 3e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 480639 AAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACA 480698 ||||| | ||| |||||||| |||||||||||||| ||||| || ||||| ||| ||| Sbjct 2260 AAAATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTAACA 2201 Query 480699 GCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTA 480758 ||| || ||||| | | | |||||||| ||||| || || || || |||||| Sbjct 2200 TTTTCGATGGTATCGGAGGGCTCCACCTCAAGGGTGATAGTCTTGCCCGTAAGGGTCTTA 2141 Query 480759 ACGAAAATTTG 480769 |||||||| || Sbjct 2140 ACGAAAATCTG 2130 >seq145091 Length=1103 Score = 86.0 bits (94), Expect = 4e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 627769 CCATCACGTCCTGCTCTACCTATTTCTTGATAATAACCTTCGATATTTTTAGGTGCGCCA 627828 ||||| || |||||||| ||| |||||||||||||| ||||||| || || || | Sbjct 658 CCATCGCGCCCTGCTCTGCCTGTTTCTTGATAATAAGCTTCGATTGTTCGTGGCGCATCG 599 Query 627829 TAATGTATTACTGCTCTCACATCTGATTTATTAATACCCATTCCAAATGCAATTGTTGCA 627888 ||| || || || |||| | ||||||||| ||||| ||||| |||| ||||| Sbjct 598 GCATGGATCACAAATCGAACATTGGGTTTATTAATGCCCATGCCAAAAGCAACCGTTGCC 539 Query 627889 ACCATTATATTTACTTTTCCATTAACAAAATTTTTATGAGCTTTT 627933 || || || | ||| | | |||| ||| ||| || |||||| Sbjct 538 ACAATGATTTGTACATCATCTTTAATGAAACTTTCCTGCGCTTTT 494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3261908144217008