Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_020416.1 Length=160221 Score E Sequences producing significant alignments: (Bits) Value seq145875 100 3e-16 >seq145875 Length=1531 Score = 100 bits (110), Expect = 3e-16 Identities = 222/326 (68%), Gaps = 18/326 (6%) Strand=Plus/Minus Query 131392 ACAATTTCATCAAAAATTTTGGCCGGGTCCGCGAACAGGTTACGCATAATGTGCGTGTAA 131451 ||||| |||||||| | | | || || || | |||||| ||||| || || ||| Sbjct 1397 ACAATATCATCAAAGACAATCGATGGATCATTGACGATGTTACGAATAATATGGGTATAA 1338 Query 131452 GAACGAGAGTGAATCGTTTCAGAGAAAGTCCAAGTCTGGTTCCAAGTATCTAATGACGGG 131511 || || ||||| || ||||| || || | ||| || | |||||| || || | || Sbjct 1337 GATCGCGAGTGGATAGTTTCTGAAAATGACCACGTTTCAACCCAAGTTTC-AAGCTCAGG 1279 Query 131512 TCA-GAAATCAAAGCAGAAAGAACTGCAGCA---GGAGCCCGTCCTTGAATACTGTCTAA 131567 | ||||| |||| || | ||| || ||| ||||||||||| || | Sbjct 1278 TATTGAAATTAAAGGG---AGCAATGCGACATTCGGACTGCGTCCTTGAATCGAATCCAG 1222 Query 131568 AAGAGACTGATATTTCAAGTTGTTAATAAAAATAtttttttGATGCTCTGGGAGTTTATC 131627 | || |||||||| ||||| | |||||||||| ||||| ||| || || ||| | | Sbjct 1221 TAAAGTTTGATATTTTAAGTTACTGATAAAAATATGTTTTTCATGTTCAGGAAGTCCAGC 1162 Query 131628 A-AATTGA---GCTC-TGTCAGTCATCAAGTTAACTTCTTCTGGGCGCCAGAAAAATGAG 131682 | ||| || | || ||| | ||| ||||||||||| ||||| ||||| || Sbjct 1161 ATAATCGATTCGATCTTGTGAAATATC-----CACTTCTTCTGGCCGCCAAAAAAAAGAT 1107 Query 131683 AGCTGCTTTTCAATCAGTTCTTCAAA 131708 | |||||||||||| |||| |||||| Sbjct 1106 AACTGCTTTTCAATTAGTTTTTCAAA 1081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511642487140960