Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq145372 134 2e-26 >seq145372 Length=1196 Score = 134 bits (148), Expect = 2e-26 Identities = 206/289 (71%), Gaps = 6/289 (2%) Strand=Plus/Minus Query 47787 TCCTGTGGCAATAACAAAATCATCAGGT-TCTTCTTGTTGAAGCATTAACCACATAGCCT 47845 ||| ||||| || ||| |||| ||| ||| | | ||| ||||||| |||||| |||| Sbjct 1143 TCCGGTGGCTATCACATAATCTGAGGGTGTCTCCCT-TTGCAGCATTAGCCACATTGCCT 1085 Query 47846 CGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAAC 47905 | ||||| || | ||||| ||||||||||| || ||| | ||| || | | ||| Sbjct 1084 CCACATAGTCCATAGCATGACCCCAGTCACGTTTTGAATCTAAATTGCCCAACTCGAAAT 1025 Query 47906 AGTCTTGCTTACCTTCAGAGATTGCTTTT--AATGCTCTTGTAATCTTACGAGTTACAAA 47963 || | | ||| ||| || |||| | || || ||||| || || || ||||| Sbjct 1024 TTTCCAGTTGACC--CAGGGAAATCTTTGCGACTGATCGCGTAATTTTTCGCGTGACAAA 967 Query 47964 AGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCC 48023 | ||||||| | | ||| ||||||||||| || || || ||| |||| ||| | || | Sbjct 966 ATTTTCACCCCTACGTGGTGATTCATGATTGAATAGGATTCCATTACAAGCAAAAATATC 907 Query 48024 GTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072 ||| | || |||||||| | || |||||||||||||| | ||||||| Sbjct 906 GTACGCCTCGCGATAGTTGATAACAATCCAGTACCCATACATTTTTGCA 858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664278242258720