Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq336 338 8e-88 seq52615 174 2e-38 seq145784 131 2e-25 seq59601 102 1e-16 seq119161 96.9 5e-15 >seq336 Length=4635 Score = 338 bits (374), Expect = 8e-88 Identities = 504/708 (71%), Gaps = 13/708 (2%) Strand=Plus/Minus Query 195294 CTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATG 195353 ||| |||| ||||||| ||||| || ||||||||||| ||||| || |||| ||| ||| Sbjct 1362 CTCCAGCTGTTGGTATTGATTTGGGTACTACTTACTCGTGTGTAGGAGTATTCCAACATG 1303 Query 195354 ATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCT 195413 || || || || | || || |||||||| ||||| || ||||| || || |||| Sbjct 1302 GCAAAGTTGAAATCATTGCCAACGATCAAGGAAATCGTACCACACCATCTTATGTCGCCT 1243 Query 195414 TTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTA 195473 | ||||||| || ||||| |||| |||||||| || |||||| |||||||| || | Sbjct 1242 TCACAGATACCGAGCGTCTTATTGGTGATGCCGCTAAGAATCAGGTTGCTATGAATCCAA 1183 Query 195474 TCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCC 195533 ||| ||| ||||||| || || ||| | ||||||||||| || |||| ||| | Sbjct 1182 CCAACACTATCTTTGATGCCAAACGTTTGATTGGTCGCAAATTCGAGGATGCCCCAGTGC 1123 Query 195534 AAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGA 195593 | || || ||| ||||| | | |||||| ||| |||| | | || || | | Sbjct 1122 AGTCAGACATGAAGCACTGGCCCTTTGAAGTAGTT---AGTGTTGAAGGAAAACCAAAAA 1066 Query 195594 TTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCC-GAAGAAATTTCGTCTATG 195652 || | || | | | | |||||| ||| | ||| |||| || || || || || ||| Sbjct 1065 TTCAAGTAATCTATAAGGATGAGAA-AAAGACTTTCTTCCCGGAGGAGATCTCTTCCATG 1007 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCA 195712 || | | ||| ||||||||||| || ||| ||| | | || || ||||| |||| Sbjct 1006 GTCCTCACTAAAATGAAGGAGACCGCAGAAGCTTACCTCGGCAAGACTGTTTCGAATGCT 947 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 || | ||||| || ||||| |||| |||||| || || || || || ||||| || | | Sbjct 946 GTCATCACTGTTCCAGCTTATTTCAATGATTCTCAGCGTCAAGCTACCAAGGATGCCGGT 887 Query 195773 GCTATTGCGGGTCTAAACTGTCTT-AGAATTATCAATGAACCAACAGCGGCTGCAATTGC 195831 ||||||| || | || ||| || | ||||| || || || ||||| || || ||||| Sbjct 886 ACTATTGCTGGATTGAA-TGTATTGCGTATTATTAACGAGCCCACAGCAGCCGCTATTGC 828 Query 195832 TTATGGTCTGGACAAGAACAAGGACGAAGATAAA---AATGTATTGATCTTTGATCTCGG 195888 ||| ||| |||||||| |||| | | | || || || | || || ||| | || Sbjct 827 TTACGGTTTGGACAAG---AAGGCTGTGGGTGAACGCAACGTTCTCATTTTCGATTTGGG 771 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGC 195948 || ||||| |||||||| || |||| ||||| | ||| || |||||||| ||| | Sbjct 770 CGGCGGTACCTTTGATGTGTCTATTCTGTCAATTGATGATGGAATTTTCGAAGTCAAGTC 711 Query 195949 TACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCT 195996 |||||||||||||||||| | || ||||||||||||||| ||||| Sbjct 710 TACTGCTGGTGATACTCACTTGGGCGGTGAAGATTTCGATAACCGTCT 663 >seq52615 Length=2943 Score = 174 bits (192), Expect = 2e-38 Identities = 728/1134 (64%), Gaps = 45/1134 (4%) Strand=Plus/Minus Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 ||||| | || | | |||| || || |||||||| || || |||| ||| | || || Sbjct 2943 GGTAAGAAGGTTACACATGCCGTCGTTACTGTACCGGCCTATTTCAACGATGCTCAGCGT 2884 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 || || || || || || | | |||||| ||| | ||| | |||||||| ||||| Sbjct 2883 CAAGCTACCAAAGATGCAGGCGTTATTGCTGGTTTGAACGTGATGAGAATTATTAATGAG 2824 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || ||||| || ||| |||||||||| ||| ||| || || || Sbjct 2823 CCCACTGCAGCCGCCATTGCATACGGTTTGGACAAGAAGGAGGGTGAA---AAGAACGTG 2767 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 ||| |||| ||| | || ||||| || || || || |||||| | | ||||| || Sbjct 2766 TTGGTCTTCGATTTGGGCGGTGGCACCTTCGACGTGTCACTTTTGACAATTGATAACGGA 2707 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCA 195991 | || ||||| || || ||| ||||| ||| | || ||||||||||||||| | Sbjct 2706 GTGTTTGAAGTCGTTGCAACCAATGGCGATACACATTTGGGCGGTGAAGATTTCGATCAA 2647 Query 195992 CGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAA-----GAAA-GATATT 196045 ||| | | |||||| | | || | ||||| || |||| ||||| Sbjct 2646 CGTGTGATGGATCATTTCATTAAATTGTAC------AAGAAAAAACGTGGAAAGGATAT- 2594 Query 196046 TCTGGAAATCCTAGGGCTCTTCGT-CGGCTTAG-GACTGCAT-GTGAA--CG----TGCC 196096 || | || | ||| | | | || | ||| | ||||| || || Sbjct 2593 --------TCGCAAGGATAACCGTGCCGTTCAGAAATTGCGTCGTGAAGTCGAGAAGGCA 2542 Query 196097 AAACGAACTCTCTCTTCTACGGCTCAAACAATG-GTTGAGATTGATTCGTTGTTTGACGG 196155 || || | || || || | | | | || | |||| ||||| ||||| || || || Sbjct 2541 AAGCGTGCCCTTTCATCCA-GCCACCAAGTGCGAATTGAAATTGAATCGTTCTTCGAGGG 2483 Query 196156 AATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT 196215 || |||| |||| | |||||||| || ||||| || ||| || ||||| Sbjct 2482 TGAGGATTTCTCCGAAACTTTGACCCGTGCCAAGTTCGAAGAATTGAACATGGACTTGTT 2423 Query 196216 TAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAA 196275 | || | || || | |||| ||| || || | ||| ||||| | Sbjct 2422 CCGTTCAACACTGAAGCCCGTACAGAAAGTTCTTGAAGATGCTGATATGAATAAGAAGGA 2363 Query 196276 GGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCT 196335 || ||||||| ||| | || || ||||||||||||||||| ||| | ||||| || | Sbjct 2362 CGTACATGAAATCGTCTTGGTCGGTGGATCAACCCGTATTCCTAAGGTACAACAATTGGT 2303 Query 196336 TTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACG-ATCAACCCGGATGAAGCAGTTG 196394 ||||||| | |||| | ||| | || ||||| ||||| || || | Sbjct 2302 GAAGGACTTCTTC-GGAGGAAAGGAACCATCAAGGGGTATTAACCCTGATGAGGCTGTCG 2244 Query 196395 CTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAG 196454 | |||||||| ||||| || |||| | ||||| |||| |||| || | | Sbjct 2243 CCTATGGTGCTGCCGTACAAGCTGGAGTCCTCTCTGGTG--AACAA----GACACTGATG 2190 Query 196455 ATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTA 196514 | || | || | || || || | | ||||| |||| || | || ||||| | Sbjct 2189 CTATTGTCCTTTTGGACGTCAATCCATTGACGATGGGTATTGAGACGGTTGGAGGTGTCA 2130 Query 196515 TGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAA 196574 |||| || |||| | |||||| |||||| || |||||| ||| | || |||| Sbjct 2129 TGACCAAGCTTATACCACGCAACACAGTTATTCCTACAAAGAAGTCACAGATTTTCTCAA 2070 Query 196575 CGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTG 196634 | || || || |||| ||| ||||| || || ||||| ||||| ||| || Sbjct 2069 CTGCCTCTGACAACCAACACACTGTCACAATTCAGGTTTACGAAGGTGAACG-TCCAATG 2011 Query 196635 -CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGA 196693 | ||||| ||||| | | || | |||||| | || || || ||| | || || || Sbjct 2010 ACCAAGGACAACCACTTGTTGGGCAAATTCGATCTTACCGGAATCCCACCAGCGCCACGA 1951 Query 196694 GGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACA 196753 ||| |||| || ||| | || | ||||| || || ||||| || ||||| | |||| Sbjct 1950 GGTATTCCTCAAATTGAAGTGTCGTTCGAAATCGATGCAAACGGTATTCTCCAAGTCAGC 1891 Query 196754 GCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAG 196807 || || ||||||| | ||||| |||||||||||||| ||||| ||| || Sbjct 1890 GCCGAAGACAAGGGCACAGGCAACAAGGAAAAGATTGTGATCACCAACGACCAG 1837 >seq145784 Length=1430 Score = 131 bits (144), Expect = 2e-25 Identities = 165/223 (74%), Gaps = 8/223 (4%) Strand=Plus/Plus Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 ||||| ||||||||||| || ||| ||| | | || ||||||||| |||||||||| Sbjct 127 ATTAAAATGAAGGAGACCGCTGAAGCTTACTTAAATACCACTGTGAAAAATGCAGTTGTT 186 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || ||||| |||||||||| ||||| ||||| || || || || || |||| | ||| Sbjct 187 ACAGTACCAGCTTACTTCAACGATTCCCAACGTCAAGCTACCAAAGATGCTGGTCAAATT 246 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 |||| | ||| | | | |||| || ||||| ||||| ||||| | || |||||| Sbjct 247 TCGGGATTGAACGTTTTGCGTGTTATTAACGAACCCACAGCAGCTGCCTTGGCCTATGGT 306 Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGT-ATTGATCTTT 195880 ||||||| |||| |||||| ||||||| | ||||| || Sbjct 307 ATGGACAA-AACA-----GAAGAT-AAAATGTAAGTGATCATT 342 >seq59601 Length=2262 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || |||||||| || || ||||||||||| ||||| ||| | || Sbjct 2127 ATGCAGATTTTCGTTAAGACCCTTACGGGCAAGACTATCACCCTTGAGGTGGAGCCCTCC 2186 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| || | ||||||||||| || || || ||||| ||||| || ||||| Sbjct 2187 GATACCATCGAAAATGTTAAAGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATCAA 2246 Query 171982 CAACGACTTATTTT 171995 || || | ||||| Sbjct 2247 CAGCGTTTGATTTT 2260 >seq119161 Length=1594 Score = 96.9 bits (106), Expect = 5e-15 Identities = 252/379 (66%), Gaps = 8/379 (2%) Strand=Plus/Minus Query 196382 GATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAA- 196440 |||||||| |||||||||||||| || || || ||||| ||| | || | |||||| Sbjct 1383 GATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCCATT-TTGCA--CGGTGACAAG 1327 Query 196441 --TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAA 196498 | | ||||| |||||| |||| |||||||| | || | || ||||| ||||| Sbjct 1326 TCCCAGGAAGTCCAGGATCTTTTGCTTCTTGATGTCACTCCATTGTCTTTGGGTATTGAA 1267 Query 196499 ACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAG 196558 || || || ||||| |||| | || | | || || || ||||| || ||| | Sbjct 1266 ACTGCCGGCGGTGTGATGAGCGTTTTGATCAAACGTAATACCACCATTCCAACAAAGCAA 1207 Query 196559 GAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAA 196618 ||| || | || ||||| || || ||||| ||||| || ||||| || || Sbjct 1206 ACCCAAACATTCACCACCTATTCAGACAACCAACCTGGTGTGTTGATCCAAGTCTACGAG 1147 Query 196619 GGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGAT 196677 || ||||| | | || | ||||| ||| | | | || | ||||| | | || || Sbjct 1146 GGTGAACG-TGCGATGACTAAGGACAACAACTTGTTGGGCAAATTCGAACTCTCTGGAAT 1088 Query 196678 TCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGG 196737 ||| | || || | ||||| || || ||| | ||| || ||||| || || || || Sbjct 1087 TCCTCCAGCTCCTCGCGGTGTCCCTCAAATTGAGGTTACTTTTGATATTGATGCCAACGG 1028 Query 196738 AATTCTAAACGTCACAGCT 196756 ||| | || || || ||| Sbjct 1027 TATTTTGAATGTAACTGCT 1009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656660189357120