Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_021073.1
Length=107218
Score E
Sequences producing significant alignments: (Bits) Value
seq145875 253 1e-62
>seq145875
Length=1531
Score = 253 bits (280), Expect = 1e-62
Identities = 317/429 (74%), Gaps = 8/429 (2%)
Strand=Plus/Plus
Query 10913 ATGAATTATTCAGTA-TTTAAC-CAAACAAAAAACGACCAACTGAAGGAGCCGATGTTCT 10970
|||||||| ||||| ||| | ||| | | || ||||||||||| || ||||||||
Sbjct 973 ATGAATTA--CAGTACTTTCTCACAAGTACACAATGACCAACTGAAAGAACCGATGTTTC 1030
Query 10971 TCGGCCAATCAGTTAACGTATCCCGTTACGACCAACAGAAACATGATGTTTTTGAGAAAC 11030
| || ||||| ||||| || | ||||| || ||||| ||| |||| ||||||| ||||
Sbjct 1031 TTGGACAATCGGTTAATGTTGCGCGTTATGATCAACAAAAATATGAAATTTTTGAAAAAC 1090
Query 11031 TAACTCAGAAGCAACTATCATTCTTCTGGCGTCCCGAAGAAGTTGATGTGTCACAAGACC 11090
||| | | ||||| |||| || || ||||| || |||||||| ||| | |||||||| |
Sbjct 1091 TAATTGAAAAGCAGTTATCTTTTTTTTGGCGGCCAGAAGAAGTGGATATTTCACAAGATC 1150
Query 11091 GAATCGACTACAGTAAAATGACTGATGCGGAGAAACACATCTTCATTAGTAACCTGAAGT 11150
||||||| || | | | |||| || ||||| || || || |||||| | || |
Sbjct 1151 GAATCGATTATGCTGGACTTCCTGAACATGAAAAACATATTTTTATCAGTAACTTAAAAT 1210
Query 11151 ACCAAACATTACTCGACTCGATCCAAGGCCGTAGCCCGAATATGGCGTTCCTGCCTATTG 11210
| ||||| ||||| || ||||| ||||| || || |||||| | || || || ||| |
Sbjct 1211 ATCAAACTTTACTGGATTCGATTCAAGGACGCAGTCCGAATGTCGCATTGCTCCCTTTAA 1270
Query 11211 TGTCACTACCAGAAGTCGAAACTTGGGTAGAAACGTGG--AGCTTCAGCGAAACCATCCA 11268
| ||| |||| || | ||||||||||| ||||||||| | |||| ||||| |||||
Sbjct 1271 TTTCAATACCTGAGCTTGAAACTTGGGTTGAAACGTGGTCATTTTCA--GAAACTATCCA 1328
Query 11269 CTCTCGTTCATACACACACATCATTCGCAATATTGTCAATGACCCTAGTATTGTGTTCGA 11328
||| || || || || || || ||||| || || |||||||| || ||||| || ||
Sbjct 1329 CTCGCGATCTTATACCCATATTATTCGTAACATCGTCAATGATCCATCGATTGTCTTTGA 1388
Query 11329 TGATGTTGT 11337
|||| ||||
Sbjct 1389 TGATATTGT 1397
Score = 237 bits (262), Expect = 1e-57
Identities = 570/835 (68%), Gaps = 28/835 (3%)
Strand=Plus/Plus
Query 10025 TCTGCATTCAACTTGGGTAAGATTGAATCGGTTGGTGATTTTGAGCGTCTGTCTCGTATC 10084
|| ||||| || | ||| | |||||||| ||| ||||||||| | || | |
Sbjct 1 TCCGCATTTAATCTTGGTGAAATTGAATCTCTTGATGATTTTGAAGAATTAGCTGATTTG 60
Query 10085 GTTGTGCGTGCATTGGATAATCTGTTAGACTACCAAAACTACCCATTACCTGCCGCA-GA 10143
| ||| |||||| | ||| || | || || ||| | |||||| | ||||| ||| ||
Sbjct 61 GCTGTACGTGCACTTGATTCACTACTGGATTATCAAGATTACCCAATTCCTGCGGCAAGA 120
Query 10144 ACGTTCGACAATGCGCAGACGTAGCCTTGGTG-TAGGTATTATCAATTACGCCCACTGGG 10202
|| | | ||||| | | || | | |||| | | ||| | ||||||||||| |||
Sbjct 121 ACAT-CATCAATGAACCGTCGAA-CATTGGGGATCGGTGTCATCAATTACGCATACTATC 178
Query 10203 TGGCTAAGAATGGCCTAAAATACAGTGACGGTAGCGCAAACAACAAGACGCATGAGCTGA 10262
| |||||| ||||| | ||||| ||| || || || || ||| |||||| || |
Sbjct 179 TTGCTAAGCATGGCGTTAAATATTCTGATGGAAGTGCTAATAACTTAACGCAT-AGAACA 237
Query 10263 TT-GAAGCTATGCAGTTCTACTTGCTACAAGCATCAATGGAACTGGCTAAAGAGAAGGGT 10321
|| ||||| ||||| | || ||||| |||| |||| | || ||||||||||| ||
Sbjct 238 TTTGAAGCAATGCAATATTATTTGCTCAAAGCTTCAAACAACCTTGCTAAAGAGAAAGGG 297
Query 10322 ATGTGTTCTGGATTCGAAGACACTAAGTATGCCAAAGGTGTTATGCCAGTTGATCGTTAT 10381
||| || ||| | || || | || | ||||| || |||| |||| ||||
Sbjct 298 GCATGTCCTTTATTTAATGAAACAACCTACTCACAAGGTATTTTGCCGATTGACACTTAT 357
Query 10382 AAGTCTGATGTCGACAAC--ACCCACACAGCAGAACTACAG-ATGAATTGGAATTGGTTG 10438
||| || | ||| | | | | ||| ||| || |||||| ||| | |||
Sbjct 358 AAGAAGGAGTTAGACGCTTTAACTAAAGAGCC--ACTCCATTATGAATGGGA-TGCTTTG 414
Query 10439 CGT-AATGAGATTGTCCATAATGGCCTACGTAACTCTACTCTATCTGCATTCATGCCTTC 10497
|| ||| | ||| | | || |||||||||||||| ||||||| ||||||| ||
Sbjct 415 CGAGAATCA-ATTAAAAAATACGGTTTACGTAACTCTACTTTATCTGCGCTCATGCCGTC 473
Query 10498 GGAAACATCTTCTCAGGTATCTAACGCAACAAACGGCATCGAACCACCTCGTGGCTACAT 10557
|||||| ||||| || | ||||| || || || || |||||||| ||||| || || |
Sbjct 474 GGAAACGTCTTCACAAATTTCTAATGCGACTAATGGAATCGAACCGCCTCGAGGTTA--T 531
Query 10558 GTCAGTT---AAGCAGTCGAAGGATGGCATCTTAAAACAAATCGTACCGGGTTATGATAA 10614
||||| ||||| ||||| |||||||| ||| ||| | || || | |||| || |
Sbjct 532 GTCAGCGTAAAAGCA-TCGAAAGATGGCATTTTACGTCAAGTTGTTCCTGATTATCATGA 590
Query 10615 ATACAAAGACCAATACGAGTTACTATGGAATAT--CAAAGACAACACTGGTTACTTGGAA 10672
||| | ||||| ||| ||||| | || | || | | ||| ||| ||||| ||
Sbjct 591 GCTTAAAAATTTCTACGAATTATTATGGCAAATTCCTAATA-ATCACGGGT-ACTTGCAA 648
Query 10673 TTGGTTGCCATCATGCAGAAGTTTGTGGATCAGGCTATTTCAGCAAACACTAACTACGA- 10731
| |||| ||||||||||| ||| | ||||| | |||||||| || ||||| |||||
Sbjct 649 CTTGTTGGTATCATGCAGAAATTTATTGATCAATCGATTTCAGCCAATACTAATTACGAT 708
Query 10732 CCCAGAAAACTACCCAGAAAGTAAGGTTCCAATCAAAAAGTTA-TTGCAAGATTTGGTGA 10790
|| | |||| | ||| | ||| || || || ||| ||||| |||| ||| || | |
Sbjct 709 CCAACAAAATTTACCA-ATGATAAAGTACCTATGAAACAGTTACTTGC-AGACTTACTTA 766
Query 10791 CATGTTATAGACTCGGCATCAAGACACTGTACTACCACAACACACGAGATGGTGC 10845
|| ||||| | |||||| || || || || || || || || |||||||||||
Sbjct 767 CAGCTTATAAATACGGCATAAAAACGCTTTATTATCATAATACTCGAGATGGTGC 821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 342361703497724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |