Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq16810 109 2e-18 seq79726 96.9 1e-14 seq145858 86.0 2e-11 >seq16810 Length=3179 Score = 109 bits (120), Expect = 2e-18 Identities = 128/171 (75%), Gaps = 4/171 (2%) Strand=Plus/Minus Query 289167 TACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226 |||||||||||| || |||||||| | || || | || ||||| || ||||| ||||| Sbjct 3107 TACATTTGCTTCTCCAGCTACTGCTCGGGCAAGTAAAGTTTTACCAGTGCCAGGGGGTCC 3048 Query 289227 CTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT--ATATTTCTCAGGGCTC 289284 | |||| | ||| |||||||| | |||| | || ||| || | |||| ||||| ||| Sbjct 3047 CACTAACAAAACACCCTTTGGAAGTTTTCCACC--TAGATTTGAAAATTTTTCAGGACTC 2990 Query 289285 TTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCT 289335 ||||| || || || | ||| | |||||| | ||| || ||||| || ||| Sbjct 2989 TTTAAGAACTCAACTACTTCTTTAAGTTCTTGTTTAGCTTCATCGCAGCCT 2939 >seq79726 Length=8148 Score = 96.9 bits (106), Expect = 1e-14 Identities = 235/347 (68%), Gaps = 12/347 (3%) Strand=Plus/Plus Query 155402 TGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCC-TGTAATTGCTCCTGC 155460 || |||||| || || ||||| || || |||| |||||| || | ||| ||| | | | Sbjct 4535 TGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTGTTTGAT--TTC 4592 Query 155461 TTGTCTTCTTGT-TTGGGTAAAAATTCACATCAATAATGTTATTTAAATTT---GTAACC 155516 || | ||| | ||||||| ||||| || ||||| || || || || || || || Sbjct 4593 TTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAGTTGCGGGTCAC- 4651 Query 155517 AATACCTTGGTTACGT-CTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAA 155575 ||| ||| || || | || | || ||| | || | | ||||| | | || || Sbjct 4652 AAT--CTTTGTGACTTGCTTC-AACTTCTGGAAATCGTACTTCTTATCGGGAGTGACGAA 4708 Query 155576 CATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTC 155635 ||| || |||| || |||| || || || ||| |||| | || ||| || Sbjct 4709 CATGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCGGAGTACTC 4768 Query 155636 TACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTT 155695 ||||||||| ||| || ||| | |||||||||||| | |||| || || || || Sbjct 4769 GACAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATGTTCTGTTGATTGGACTT 4828 Query 155696 ACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCA 155742 | ||| |||||||| ||||| || ||||| || ||||| ||||||| Sbjct 4829 GCGGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCA 4875 >seq145858 Length=1503 Score = 86.0 bits (94), Expect = 2e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 448899 GAAATCAAGAAGGCATATAAACGACTCGCAATTAAACATCATCCTGATAAAAATCCAGAT 448958 || || || || || |||||||| || ||||| ||| |||| ||||| ||||||| |||| Sbjct 845 GAGATAAAAAAAGCCTATAAACGCCTTGCAATGAAATATCACCCTGACAAAAATCAAGAT 904 Query 448959 AATAAAGCAGAGGCAGAGGAGAAATTCAAAGA 448990 ||||| || ||| |||| | ||||||||||| Sbjct 905 AATAAGGCTGAGTCAGAAGCAAAATTCAAAGA 936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1469060685100052