Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_021529.2
Length=247511
Score E
Sequences producing significant alignments: (Bits) Value
seq146010 107 3e-18
>seq146010
Length=1781
Score = 107 bits (118), Expect = 3e-18
Identities = 596/940 (63%), Gaps = 38/940 (4%)
Strand=Plus/Minus
Query 171957 TAAAGAAAACGCGAATAAAGACTCGAAAGTGATCCCTACAATGCGTGACTTGGTAGCAGG 172016
||| ||||| || ||||||||| ||||| ||||| ||| || || | |||| ||
Sbjct 1329 TAATGAAAATGCTAATAAAGACAGTAAAGTAATCCCAACACAACGGGATCTATTAGCGGG 1270
Query 172017 TACAGTTGCGAAACAATACGCACTCGAAG----ACTTTCTACCGAAGCACATTGCAGAAG 172072
|| || || || || || |||| | || | || || | ||| || |
Sbjct 1269 TATCGTCGCCCGTCATTATGC----GAAGCAGTATCTTTTGCCAAAAGATATTTCAAGCG 1214
Query 172073 CACATATAAGTGGCGATATTCATTTTCATGATTTAGATTACAGTCCATTATTTCCGCAAT 172132
| ||| |||| || ||||||| ||||||||| ||||| ||||| ||||| |
Sbjct 1213 CCCATGACCGTGGAGAAATTCATTATCATGATTTGGATTATGCACCATTTTTTCCAATGT 1154
Query 172133 TCAACTGTATGCTTATTGATATCAAAGGCATGCTTGAAAACGGATTTAAAATGGGTAATG 172192
| || || ||| | || ||| | | ||||||||| ||||| ||||||||||| || |
Sbjct 1153 TTAATTGCATGTTAATCGATCTAGATGGCATGCTTACCAACGGTTTTAAAATGGGCAACG 1094
Query 172193 CTGAGATCGAAGAGCCAAACAGTATCGCGACTGCTGCGACTATTGTCAC---TCAGATCA 172249
| || || ||| ||| || ||| || || || | | ||||| ||| || |
Sbjct 1093 CCGAAATTGAACCGCCTAAATCTATTGCAACGGCAACCGCG---GTCACGGCTCAAATTA 1037
Query 172250 TACAACAAGTAAGTAGTCACATTTACGGCGGCAACACTGTTAATAGAATTGACGAAGTTC 172309
| || || || || |||||||| || | || ||||| | || || || |
Sbjct 1036 TTGCTCAGGTGGCAAGCCATATTTACGGTGGAACGACAATTAATCGTATCGATGAGATAT 977
Query 172310 TAGCACCATATGTTCGTA--AGTCGTATTACAAATGGCTTGAGGTTGGTCGCGA-AGAGC 172366
||||| || |||| ||| ||| ||| | ||| | | || | |||||| ||||
Sbjct 976 TAGCAAAATTTGTTAGTATCAGT--TATCAAAAA---CATAAGCAAG-TCGCGACAGAGT 923
Query 172367 ATCCCGATTCAGACTCAAAAGCAGCTATCTTTGCACGTAAACGTGTCGAGAAAGAAACGT 172426
| || | | || | || || |||| || || || ||||| |
Sbjct 922 GGCAA-ATAAAAAATCCTGACCA-----CTATGCAAAAAATCGCACTGAAAAAGAGTGTT 869
Query 172427 ACGACGCTTTTCAAACGTTTGAGTATCAAGTTAACACAATGCAGACTTCGAACGGTCAGA 172486
| || || || ||| | ||||||| |||| |||||| | || || | || ||||| |
Sbjct 868 ATGATGCATTCCAATCTCTTGAGTACGAAGTGAACACACTCCACACCGCTAATGGTCAAA 809
Query 172487 CGCCATTCACGACGATTAACTTCGGTCTAGGTACATCGTGGGAAGAAAAGCTTATTCAGA 172546
||||||| || || ||| || |||||| | |||||| | || || ||
Sbjct 808 CGCCATTTGTTACATTTGGCTTTGGATTAGGTAAAAGTTGGGAATCACGACTCATCCAAG 749
Query 172547 AATGCATTCTGCAAAATCGAATTGCTGGTCTAGGCAAGACAAAGAAAACAGCGATTTTCC 172606
||| ||| | ||| || | || |||| |||| | |||||||| |||| |
Sbjct 748 AATCTATTTTAAAAATACGTTTAAAAGGATTAGGAAAGAACCACAAAACAGCAGTTTTTC 689
Query 172607 CGAAACTTGTATTCACTATCAAAGATGGTGTGAACTTGAAAGAAGGCGATCCGTGTTACG 172666
| ||| | || || | || |||||||| || || || | || ||| ||| |
Sbjct 688 CAAAATTGGTGTTTGCAATAAAAGATGGCGTTAATCATAAGGTTGGTGATATCAATTATG 629
Query 172667 GCATTAAGAAGCTTGCACTTGAATGCGCAAGTAAGCGCATGTATCCAGATATCTTGAGCT 172726
|| || || || ||| | ||||| ||||||||||| ||||| || ||||| || | |
Sbjct 628 ATATCAAAAAACTCGCATTAGAATGTGCAAGTAAGCGTATGTACCCCGATATTTTAAATT 569
Query 172727 ATGAAAAGCTAGTAGAAACAACTGGCGGGTTTAAGTCACCGATGGGATGTCGT-TCATTC 172785
| || || | || | ||| || || || | || |||||||| ||| | |||
Sbjct 568 ACGATAAAGTGGTCGCGGTAACGGGTTCATTCAAAACGCCAATGGGATGCCGTAGCTTTC 509
Query 172786 TTAGGCGACTGGAAAAACGAAGATGG--TGAAACTGTATTCGACGGTCGAAACAATCTAG 172843
|| |||| | | | |||||||| | || | || ||||| ||||| ||| |||
Sbjct 508 TT-GGCGTAT---ATGAGGAAGATGGCAAGCAAGTTCAT--GACGGACGAAATAATTTAG 455
Query 172844 GCGTTGTCTCGTTGAACATTCCCCGAATTGCAATTGAAGC 172883
| || | || ||| | || |||||||||||||||||
Sbjct 454 GTGTCATAAGTTTAAACTTACCGCGAATTGCAATTGAAGC 415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 790460029187360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |