Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq146010 107 3e-18 >seq146010 Length=1781 Score = 107 bits (118), Expect = 3e-18 Identities = 596/940 (63%), Gaps = 38/940 (4%) Strand=Plus/Minus Query 171957 TAAAGAAAACGCGAATAAAGACTCGAAAGTGATCCCTACAATGCGTGACTTGGTAGCAGG 172016 ||| ||||| || ||||||||| ||||| ||||| ||| || || | |||| || Sbjct 1329 TAATGAAAATGCTAATAAAGACAGTAAAGTAATCCCAACACAACGGGATCTATTAGCGGG 1270 Query 172017 TACAGTTGCGAAACAATACGCACTCGAAG----ACTTTCTACCGAAGCACATTGCAGAAG 172072 || || || || || || |||| | || | || || | ||| || | Sbjct 1269 TATCGTCGCCCGTCATTATGC----GAAGCAGTATCTTTTGCCAAAAGATATTTCAAGCG 1214 Query 172073 CACATATAAGTGGCGATATTCATTTTCATGATTTAGATTACAGTCCATTATTTCCGCAAT 172132 | ||| |||| || ||||||| ||||||||| ||||| ||||| ||||| | Sbjct 1213 CCCATGACCGTGGAGAAATTCATTATCATGATTTGGATTATGCACCATTTTTTCCAATGT 1154 Query 172133 TCAACTGTATGCTTATTGATATCAAAGGCATGCTTGAAAACGGATTTAAAATGGGTAATG 172192 | || || ||| | || ||| | | ||||||||| ||||| ||||||||||| || | Sbjct 1153 TTAATTGCATGTTAATCGATCTAGATGGCATGCTTACCAACGGTTTTAAAATGGGCAACG 1094 Query 172193 CTGAGATCGAAGAGCCAAACAGTATCGCGACTGCTGCGACTATTGTCAC---TCAGATCA 172249 | || || ||| ||| || ||| || || || | | ||||| ||| || | Sbjct 1093 CCGAAATTGAACCGCCTAAATCTATTGCAACGGCAACCGCG---GTCACGGCTCAAATTA 1037 Query 172250 TACAACAAGTAAGTAGTCACATTTACGGCGGCAACACTGTTAATAGAATTGACGAAGTTC 172309 | || || || || |||||||| || | || ||||| | || || || | Sbjct 1036 TTGCTCAGGTGGCAAGCCATATTTACGGTGGAACGACAATTAATCGTATCGATGAGATAT 977 Query 172310 TAGCACCATATGTTCGTA--AGTCGTATTACAAATGGCTTGAGGTTGGTCGCGA-AGAGC 172366 ||||| || |||| ||| ||| ||| | ||| | | || | |||||| |||| Sbjct 976 TAGCAAAATTTGTTAGTATCAGT--TATCAAAAA---CATAAGCAAG-TCGCGACAGAGT 923 Query 172367 ATCCCGATTCAGACTCAAAAGCAGCTATCTTTGCACGTAAACGTGTCGAGAAAGAAACGT 172426 | || | | || | || || |||| || || || ||||| | Sbjct 922 GGCAA-ATAAAAAATCCTGACCA-----CTATGCAAAAAATCGCACTGAAAAAGAGTGTT 869 Query 172427 ACGACGCTTTTCAAACGTTTGAGTATCAAGTTAACACAATGCAGACTTCGAACGGTCAGA 172486 | || || || ||| | ||||||| |||| |||||| | || || | || ||||| | Sbjct 868 ATGATGCATTCCAATCTCTTGAGTACGAAGTGAACACACTCCACACCGCTAATGGTCAAA 809 Query 172487 CGCCATTCACGACGATTAACTTCGGTCTAGGTACATCGTGGGAAGAAAAGCTTATTCAGA 172546 ||||||| || || ||| || |||||| | |||||| | || || || Sbjct 808 CGCCATTTGTTACATTTGGCTTTGGATTAGGTAAAAGTTGGGAATCACGACTCATCCAAG 749 Query 172547 AATGCATTCTGCAAAATCGAATTGCTGGTCTAGGCAAGACAAAGAAAACAGCGATTTTCC 172606 ||| ||| | ||| || | || |||| |||| | |||||||| |||| | Sbjct 748 AATCTATTTTAAAAATACGTTTAAAAGGATTAGGAAAGAACCACAAAACAGCAGTTTTTC 689 Query 172607 CGAAACTTGTATTCACTATCAAAGATGGTGTGAACTTGAAAGAAGGCGATCCGTGTTACG 172666 | ||| | || || | || |||||||| || || || | || ||| ||| | Sbjct 688 CAAAATTGGTGTTTGCAATAAAAGATGGCGTTAATCATAAGGTTGGTGATATCAATTATG 629 Query 172667 GCATTAAGAAGCTTGCACTTGAATGCGCAAGTAAGCGCATGTATCCAGATATCTTGAGCT 172726 || || || || ||| | ||||| ||||||||||| ||||| || ||||| || | | Sbjct 628 ATATCAAAAAACTCGCATTAGAATGTGCAAGTAAGCGTATGTACCCCGATATTTTAAATT 569 Query 172727 ATGAAAAGCTAGTAGAAACAACTGGCGGGTTTAAGTCACCGATGGGATGTCGT-TCATTC 172785 | || || | || | ||| || || || | || |||||||| ||| | ||| Sbjct 568 ACGATAAAGTGGTCGCGGTAACGGGTTCATTCAAAACGCCAATGGGATGCCGTAGCTTTC 509 Query 172786 TTAGGCGACTGGAAAAACGAAGATGG--TGAAACTGTATTCGACGGTCGAAACAATCTAG 172843 || |||| | | | |||||||| | || | || ||||| ||||| ||| ||| Sbjct 508 TT-GGCGTAT---ATGAGGAAGATGGCAAGCAAGTTCAT--GACGGACGAAATAATTTAG 455 Query 172844 GCGTTGTCTCGTTGAACATTCCCCGAATTGCAATTGAAGC 172883 | || | || ||| | || ||||||||||||||||| Sbjct 454 GTGTCATAAGTTTAAACTTACCGCGAATTGCAATTGAAGC 415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 790460029187360