Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq79726 295 6e-75 seq59601 100 3e-16 >seq79726 Length=8148 Score = 295 bits (326), Expect = 6e-75 Identities = 971/1497 (65%), Gaps = 47/1497 (3%) Strand=Plus/Plus Query 138154 TTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCC 138213 || || ||||| |||| || |||| || || || || || | || || ||||| || Sbjct 3807 TTGTCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTTGTGCGTAGGTAGTACATGCCA 3866 Query 138214 GTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGGT 138273 || || | || | |||| || | | ||| |||||||| | | |||| ||||| Sbjct 3867 GTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTCGGT 3926 Query 138274 TTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCC 138333 | |||| | ||||| ||||||||||| ||||||||||| ||||| | ||| ||| Sbjct 3927 TCAGCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCAGCC 3986 Query 138334 ATGTTAAT--TAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391 || ||||| | | | | ||||||||||| |||||||| || ||||| || | Sbjct 3987 ATTTTAATGGTCGACCGCACCGAT--ATCTCCCACACAGTCTTGTACAGCTCACGGATTT 4044 Query 138392 GTCGCGGTATTGTTGCAATATTTTGAAT-GCTCC-CGTTGGCCGCAATGATGCGATTTCT 138449 | | || ||| | || | || || | ||| ||||| || ||||| ||| | Sbjct 4045 CTTGTGGAATTCGCTCGATTTGCTGGATTGATCCTCGTTGTGCG--ATGATTTCATTCTT 4102 Query 138450 CATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGAC 138509 ||||||||||| ||| | ||||| | | || || | || | | || | || Sbjct 4103 CATGTCATCGTCCCACAAGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTGATTGACGAT 4162 Query 138510 CTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGA 138569 || || || || | || || || | ||| ||||| ||| | ||||||||||| Sbjct 4163 TTGGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTACGGCTCAAACGA 4222 Query 138570 TTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGA 138629 ||||||||| || || || || || || | || |||||||| || | || || || Sbjct 4223 TTCGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAGCGA 4282 Query 138630 ATTCCGTAAACCGTGA--AGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCG 138687 |||| | |||||| ||| ||| ||||| || | | ||| ||||||| ||| Sbjct 4283 GTTCCTAACACCGTGCTTAGCAATTTTC--TCCTTCAGAGCAGCCCAATCCCACAGATCA 4340 Query 138688 CTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCG 138747 | |||| ||||||||||| |||||||| | |||||| ||| |||||| || || Sbjct 4341 GTTGGTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCCTCA 4400 Query 138748 TACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAG 138807 || | |||||| |||| || | |||| || ||| ||||| || || |||||| Sbjct 4401 TAGGTTTCGTATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTCCATAG 4460 Query 138808 TAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATG 138867 || || |||||| || || || ||||| | | | | | |||||||||| || | Sbjct 4461 TAGATGGTTTCGAAGATTTGTTGGTTGAGAAGTTGCGATTGTTCGCTCTCGTATGGATAG 4520 Query 138868 CGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGC 138927 || | || ||| |||||||| | ||||| || || | ||||| ||||| || || Sbjct 4521 CGCATCAGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGT 4580 Query 138928 AGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAA 138987 ||||| || || || || || || | || || || || |||||||| || Sbjct 4581 GTGTTTGATTTCTTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAG 4640 Query 138988 TTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTG 139047 || || || | ||| || ||||| || | |||||||| | || Sbjct 4641 TTGCGGGTCACAATCTTTGTGACTTGCTTCAACTTCTGGAAATCGTA------CTTCTTA 4694 Query 139048 TCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACT 139107 ||| | || ||| || |||| | ||| || || | |||||| || || | Sbjct 4695 TCG-----GGAGT-GACGAACATGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATC 4748 Query 139108 TCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCT 139167 || || || || ||| |||||||| || | || | |||||| |||||||| || || Sbjct 4749 TCATCCGGTGCGGAGTACTCGACAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCG 4808 Query 139168 AAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCA 139227 | || ||||||||| || ||||| |||||||||||||| ||||| ||||| || || Sbjct 4809 ATGTTCTGTTGATTGGACTTGCGGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCG 4868 Query 139228 GTTTCCACTTGTGTCTCTATAATG--AATTTGAACAAGTCCCTAGCTTGTATTTGACGCA 139285 || |||||||| | ||||||||| || | ||| | | |||| || | || Sbjct 4869 GTCTCCACTTGAGATTCTATAATGGCAA----ACCAAAGC----GTTTGTGCTT-TCACA 4919 Query 139286 CGTAAAGTT--------CGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACC 139337 || ||| | || |||||| ||| || || ||||| || || Sbjct 4920 -GTTCTGTTTGCCTTTCCCTCCTTCTCGTAACGGGTGTACAGCTCCTCGAACTTCTCCCC 4978 Query 139338 GTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGC 139397 || | ||| | | || | ||||| | || ||||| | ||||| |||||| || Sbjct 4979 CCAGACTTCATGCAAACCGGGGCACTTATGTGGGCACATCAAAGACCAGTCGCCGTCGGC 5038 Query 139398 CTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTT 139457 | || ||| ||||||||||||| |||||||| | ||| | | ||||||||| || | Sbjct 5039 TTCCACTCGCTTCATGAACAGATCGGGAATCCATAGAGCATAGAACAAATCGCGAGCTCT 5098 Query 139458 CTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCA 139517 || || ||| || |||| |||| | | ||| ||||| | ||| | ||||| Sbjct 5099 GTTCTCCTCCTTTCCGGTGTTCTTCTTCAAATCCAAGAACTCAAAGATGTCCGAATGCCA 5158 Query 139518 TGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCG 139574 || |||| || ||||| | || ||| || || ||| ||||| ||||| | || Sbjct 5159 GGGCTCCAAGTAAATGGCGAAGGCACCTGGTCGCTTGCCGCCTCCTTGGTCGACATACCG 5218 Query 139575 TACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT 139631 | | || ||||| | | || ||| || | || ||| | | || ||||| || Sbjct 5219 AGCGACGTTGTTGAACCCTCTCAGCATTGGAACAAGGCCGTTTGAGGTACCGTTTGT 5275 >seq59601 Length=2262 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || |||| || || || || || ||||| || || || || || || | Sbjct 2126 GATGCAGATTTTCGTTAAGACCCTTACGGGCAAGACTATCACCCTTGAGGTGGAGCCCTC 2185 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| || | |||| || ||| |||||||| |||||||||||||| ||||| ||||| Sbjct 2186 CGATACCATCGAAAATGTTAAAGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATCA 2245 Query 24823 ACAACGTTTGATCTT 24837 ||| |||||||| || Sbjct 2246 ACAGCGTTTGATTTT 2260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449075434630880