Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq336 342 4e-88 seq119161 131 1e-24 seq52615 129 4e-24 seq46338 98.7 7e-15 seq2084 98.7 7e-15 seq117123 95.1 9e-14 seq145091 86.0 5e-11 >seq336 Length=4635 Score = 342 bits (378), Expect = 4e-88 Identities = 600/867 (69%), Gaps = 10/867 (1%) Strand=Plus/Plus Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077 |||| |||||||||| | ||||||| ||| || | | ||| || || || ||||| | Sbjct 496 AATCGGTTCCTTCGAAAAGTGAATCAATTTCTATGCTGGCTTGCGTAGATGATGATAGCG 555 Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT--T 282135 ||| || || | |||||| || || | | | || | || ||| ||| | | Sbjct 556 TACGCTTTGCTCTTTCACAGGCAGTACGCAAACGACGCAGAGCAC--GCTTGTTGGTGGT 613 Query 282136 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 282195 || ||| |||| | ||| | |||||| || | || | || || ||||| ||||| Sbjct 614 CAGATCCTTTTTGTGTTTGCGCTTGAACTCCTGCACGAAGTGGGTAACTAGACGGTTATC 673 Query 282196 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 282255 ||||||||||| ||||| | ||||| || | |||| | |||| ||||| |||||| Sbjct 674 GAAATCTTCACCGCCCAAGTGAGTATCACCAGCAGTAGACTTGACTTCGAAAATTCCATC 733 Query 282256 TTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 282315 |||| |||| || || |||||| ||| || || |||| ||| ||||| || || || Sbjct 734 ATCAATTGACAGAATAGACACATCAAAGGTACCGCCGCCCAAATCGAAAATGAGAACGTT 793 Query 282316 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 282375 ||| | || || || | ||| || |||| ||| || || || || || || Sbjct 794 GCGTTCACCCACAGCCTTCTTGTCCAAACCGTAAGCAATAGCGGCTGCTGTGGGCTCGTT 853 Query 282376 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 282435 |||||| | ||| ||||| | |||||||| | || ||||| || || ||||| | || Sbjct 854 AATAATACGCAATACATTCAATCCAGCAATAGTACCGGCATCCTTGGTAGCTTGACGCTG 913 Query 282436 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATA 282495 ||||| || ||||| || |||||||| || || |||| | || || || | || Sbjct 914 AGAATCATTGAAATAAGCTGGAACAGTGATGACAGCATTCGAAACAGTCTTGCCGAGGTA 973 Query 282496 AGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATA 282555 ||| ||| || | ||||||||| | | | ||| || || || | || || ||| | Sbjct 974 AGCTTCTGCGGTCTCCTTCATTTTAGTGAGGACCATGGAAGAGATCTCCTCCGG-GAAGA 1032 Query 282556 TTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAA 282614 | ||| |||| | ||| ||||| || | |||||| ||||| ||| | Sbjct 1033 AAGTCTTTTTCTCATCCTTATAGATTACTTGAATTTTTGGTTTTCCTTCAACACTAACTA 1092 Query 282615 CTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACC 282672 ||| ||| ||||| | ||||| ||||| || |||| || || | || | | ||| Sbjct 1093 CTTCAAAGGGCCAGTGCTTCATGTCTGACTG--CACTGGGGCATCCTCGAATTTGCGACC 1150 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 ||| || ||||| |||||||| ||||| ||||||||||| | ||| | |||| || || Sbjct 1151 AATCAAACGTTTGGCATCAAAGATAGTGTTGGTTGGATTCATAGCAACCTGATTCTTAGC 1210 Query 282733 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 282792 ||||| ||||| ||| | || || ||||| || | ||||| ||||| || || ||||| Sbjct 1211 GGCATCACCAATAAGACGCTCGGTATCTGTGAAGGCGACATAAGATGGTGTGGTACGATT 1270 Query 282793 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 282852 |||||||| || ||||| ||||||||||| |||| ||| |||| |||||||| | Sbjct 1271 TCCTTGATCGTTGGCAATGATTTCAACTTTGCCATGTTGGAATACTCCTACACACGAGTA 1330 Query 282853 AGTTGTTCCTAAATCAATACCAATAGC 282879 ||| || || ||||||||||||| ||| Sbjct 1331 AGTAGTACCCAAATCAATACCAACAGC 1357 >seq119161 Length=1594 Score = 131 bits (144), Expect = 1e-24 Identities = 281/420 (67%), Gaps = 0/420 (0%) Strand=Plus/Plus Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 || || || ||||| || || ||||| ||||| | || ||||| ||||| | | Sbjct 965 TTTGTGATGGTAATCTTATTTTCCTTGTTGGTTGACCTTTCTAGAGCAGTTACATTCAAA 1024 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 ||||| |||||||| | |||||| || || |||||||||||||| || | |||| || Sbjct 1025 ATACCGTTGGCATCAATATCAAAAGTAACCTCAATTTGAGGGACACCGCGAGGAGCTGGA 1084 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | ||| | |||| || || || ||||| | |||||| Sbjct 1085 GGAATTCCAGAGAGTTCGAATTTGCCCAACAAGTTGTTGTCCTTAGTCATCGCACGTTCA 1144 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 |||||| | | |||||| || ||| ||| || |||||||| || || ||| | | Sbjct 1145 CCCTCGTAGACTTGGATCAACACACCAGGTTGGTTGTCTGAATAGGTGGTGAATGTTTGG 1204 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 | || || ||||| || || || | | || | | | |||| | ||| || || Sbjct 1205 GTTTGCTTTGTTGGAATGGTGGTATTACGTTTGATCAAAACGCTCATCACACCGCCGGCA 1264 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740 ||||| | ||| | ||| | ||||||||||||| || | || || || | || | Sbjct 1265 GTTTCAATACCCAAAGACAATGGAGTGACATCAAGAAGCAAAAGATCCTGGACTTCCTGG 1324 Query 281741 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 281800 | | ||| | ||| || ||||| | |||||||||||| ||||||||||||||| Sbjct 1325 GACTTGTCACCGTGCAAAATGGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCATCA 1384 >seq52615 Length=2943 Score = 129 bits (142), Expect = 4e-24 Identities = 675/1060 (64%), Gaps = 32/1060 (3%) Strand=Plus/Plus Query 281438 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 281497 |||||||| || ||||| | || || | |||||||||||||| | |||| | || Sbjct 1901 AGAATACCGTTTGCATCGATTTCGAACGACACTTCAATTTGAGGAATACCTCGTGGCGCT 1960 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557 |||||||| || | || ||| | |||| | || || || || | | ||| Sbjct 1961 GGTGGGATTCCGGTAAGATCGAATTTGCCCAACAAGTGGTTGTCCTTGGTCATTGGACGT 2020 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGT-TTGATTATCTGAATAAGTTGTAAATAC 281616 ||||| ||| ||| || || || || | || ||| || || || ||||| || | Sbjct 2021 TCACCTTCGTAAACCTGAATTGTGAC-AGTGTGTTGGTTGTCAGAGGCAGTTGAGAAAA- 2078 Query 281617 TCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCAC 281675 |||| || || || |||||| |||||| | |||| |||||||| | ||| | Sbjct 2079 TCTGTGACTTCTTTGTAGGAATAACTGTGTTGCGTGGTATAAGCTTGGTCATGACACCTC 2138 Query 281676 CAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTT 281735 || | || || | ||| | | | ||| |||| || | ||||||||| | | | Sbjct 2139 CAACCGTCTCAATACCCATCGTCAATGGATTGACGTCCAAAAGGACAATAGCATCAGTGT 2198 Query 281736 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 || ||| ||| || | | ||||| | ||||||||||| || ||||| | Sbjct 2199 CTTGTTCA------CCAGAGAGGACTCCAGCTTGTACGGCAGCACCATAGGCGACAGCCT 2252 Query 281796 CATCAGGATTAACAGTTTCATTTA--GTTTTTTACCATTGAAAAAATTTGAAAGAAGTTG 281853 ||||||| |||| | | || | ||| || || ||| || | | | ||| Sbjct 2253 CATCAGGGTTAATACC--CCTTGATGGTTCCTTTCCTCCGAAGAAGTCCTTCACCAATTG 2310 Query 281854 TCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTT 281913 | ||||||||||||||| | |||||| || || || || |||||||| || | || Sbjct 2311 TTGTACCTTAGGAATACGGGTTGATCCACCGACCAAGACGATTTCATGTACGTCCTTCTT 2370 Query 281914 ATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTC 281973 || || | | ||| | |||||| | ||||| | || | | |||||||| Sbjct 2371 ATTCATATCAGCATCTTCAAGAACTTTCTGTACGGGCTTCAGTGTTGAACGGAACAAGTC 2430 Query 281974 --TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCG 282031 || ||| ||||||||| || || | || | ||| | |||| || ||| Sbjct 2431 CATGTTCAA--TTCTTCGAACTTGGCACGGGTCAAAGTTTCGGAGAAATCCTCACCCTCG 2488 Query 282032 AACAAAGAATCAACTTCAAT-CGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACG 282090 || || || |||| |||||| || | || | | | || || || ||||| || || Sbjct 2489 AAGAACGATTCAATTTCAATTCGCACTTGGTGGCTG-GATGAAAGGGCACGCTTTGCCTT 2547 Query 282091 TTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTATA 282150 || | | | | | | | | ||| | | || | | ||| | ||| | Sbjct 2548 CTCGACTTCACGACGCAATTTCTGAACGGCAC--GGTTATCCTTGCGAATATCCTTTCCA 2605 Query 282151 --TTTTCTCTTGAAATCTTCAACACACCATGTTACA--AGACGATTATCAAAATCTTCAC 282206 |||| ||||| | || || | ||| | || | ||| | ||| |||||||||| Sbjct 2606 CGTTTTTTCTTGTACAATTTAATGAA--ATGATCCATCACACGTTGATCGAAATCTTCAC 2663 Query 282207 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 282266 | ||||| | |||| || || || |||| || | ||| | |||| | || Sbjct 2664 CGCCCAAATGTGTATCGCCATTGGTTGCAACGACTTCAAACACTCCGTTATCAATTGTCA 2723 Query 282267 AAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT 282326 |||| | || || ||| ||||| |||| ||| || | | || ||| |||| | Sbjct 2724 AAAGTGACACGTCGAAGGTGCCACCGCCCAAATCGAAGACCAACACGTTCTTTTCACCCT 2783 Query 282327 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 282386 | | | || || | ||| || |||| || || ||||| || |||||||||||||||| Sbjct 2784 CCT---TCTTGTCCAAACCGTATGCAATGGCGGCTGCAGTGGGCTCATTAATAATTCTCA 2840 Query 282387 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 282446 || || | ||||||||| ||||||||||| || ||||| | || | |||||| | Sbjct 2841 TCACGTTCAAACCAGCAATAACGCCTGCATCTTTGGTAGCTTGACGCTGAGCATCGTTGA 2900 Query 282447 AATATGCAGGAACAGTAATAACGGCATCTGTTA-CTTCTT 282485 |||| || || ||||||| ||||||| ||| | |||||| Sbjct 2901 AATAGGCCGGTACAGTAACGACGGCATGTGTAACCTTCTT 2940 >seq46338 Length=2048 Score = 98.7 bits (108), Expect = 7e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| |||||||||||| | || |||||||||||||| ||||||||| | || || ||| Sbjct 754 GGTAAGGAAGGTCGTATTCGTGGTAATTTGATGGGAAAACGTGTCGATTTCTCGGCTCGT 813 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || || ||| | ||||| ||| | | | || ||||||| ||||| | ||| Sbjct 814 ACTGTCATCACTCCAGATCCCAATCTACGTATTGATCAAGTTGGCGTTCCACGTTCGATT 873 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAAC 432439 || | |||||||| ||| ||| | ||||| Sbjct 874 GCACAGAATCTTACCTTTCCCGAGCTGGTAAC 905 >seq2084 Length=1588 Score = 98.7 bits (108), Expect = 7e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131183 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAC 131242 || |||||||| ||||||||||||||| ||||||| ||||| || | ||| | |||||| Sbjct 1538 GCTACAATAGCCTTTGGTATGGGTATTGATAAACCCGATGTAAGGTTCGTTTTGCATTAC 1479 Query 131243 GGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGA 131302 | ||||||| ||| || || |||||||||||| ||| | || ||||| ||||| Sbjct 1478 TCATTACCCAAGAGTATCGAGGGCTATTATCAAGAAGCCGGTCGTGCTGGTCGCGATGGT 1419 Query 131303 GA 131304 || Sbjct 1418 GA 1417 >seq117123 Length=8748 Score = 95.1 bits (104), Expect = 9e-14 Identities = 239/361 (66%), Gaps = 13/361 (4%) Strand=Plus/Plus Query 400262 ATGCTCACAAAGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTGACAGAGGGAG 400321 ||||| || |||| || | ||| | | | || ||| || || ||| | ||||| |||| Sbjct 2737 ATGCTAACGAAGCTGGGTCAAAAAATGCACATTTATGCACACTTATTCTCACAGAAGGAG 2796 Query 400322 ATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATGTTATTGGAAGAGATTATTATGGAG 400381 | ||||| ||| || | || | ||||||||| ||| |||| |||||| ||||| | Sbjct 2797 ACTCAGCCAAATCACTGGCAGTTTCTGGCCTTGGTGTAGTTGGCCGAGATTTATATGGTG 2856 Query 400382 TTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTGCCG 400441 | || ||| | | || || |||||||||||| | || |||| | || ||||| | Sbjct 2857 TGTTTCCATTGCGTGGTAAGCTTTTGAATGTTCGTGAAGCTACTTACAAGCAAATTCTGG 2916 Query 400442 ATAATGAGGAAATTACAGCAATC-----aaaaaaaTTG--TTGGACTTGAACAAGGAAAA 400494 | |||| ||||| || |||| |||| || | || | | || ||| || | Sbjct 2917 AAAATGCTGAAAT--CAATAATCTTATTAAAATCATCGGTTTACAGTATAAAAAGAAATA 2974 Query 400495 GTTTA----TGATGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCA 400550 ||| ||||||||| || || || || || | | |||||| | ||||||| Sbjct 2975 TCTTAGCGTTGATGATCTTAAGTCATTGCGCTACGGAAAAGTAATGATTATGACTGATCA 3034 Query 400551 AGATGTTGATGGGTACCATATCAAAGGATTAATCATGAATTTTATCCATTGTTTTTGGCC 400610 ||| ||||| | ||||| || || || |||| || ||||| || | |||||| Sbjct 3035 GGATCAAGATGGCTCGCATATTAAGGGCTTGCTCATTAACTTTATTCACACTAATTGGCC 3094 Query 400611 a 400611 | Sbjct 3095 A 3095 >seq145091 Length=1103 Score = 86.0 bits (94), Expect = 5e-11 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 131104 CTATCATGCAGGTTTATCAAACGAACACAAGACAAAAA-CTCATACTAATTTTATCAATA 131162 |||||| ||||| | |||| ||| || | |||||| | || | ||| || || Sbjct 461 CTATCACGCAGGACTTGCAAATGAAGACC-GTCAAAAAGCGCAGGAAAGTTTCATTAAAG 519 Query 131163 ATAAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATG 131222 || | || |||| | || || || | || ||||| ||||| ||||||||||| ||| Sbjct 520 ATGATGTACAAATCATTGTGGCAACGGTTGCTTTTGGCATGGGCATTAATAAACCCAATG 579 Query 131223 TTAGAGTTGTTATTCATTACGGAGCTCCCAAGAA-TATTGAAGGTTATTATCAAGAAATT 131281 || || |||| || ||| || || ||| ||| || |||| |||||||||||||| Sbjct 580 TTCGATTTGTGATCCATGCCGATGC-GCCACGAACAATCGAAGCTTATTATCAAGAAACA 638 Query 131282 GGTAGAGCAGGTCGTGATGG 131301 || |||||||| || ||||| Sbjct 639 GGCAGAGCAGGGCGCGATGG 658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3733452794224296