Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq79726 98.7 1e-15 >seq79726 Length=8148 Score = 98.7 bits (108), Expect = 1e-15 Identities = 680/1082 (63%), Gaps = 40/1082 (4%) Strand=Plus/Plus Query 150392 GCCGCCGGAAGTGTGCGAAAATAGTACATGCCGGTTTTGAGGCCGCGCTTCCAACCGTAC 150451 || ||||| |||||| | ||||||||||| || |||||||| |||||| ||| | Sbjct 3834 GCTGCCGGCTTTGTGCGTAGGTAGTACATGCCAGTCTTGAGGCCCGCCTTCCAGCCGAAG 3893 Query 150452 ATGTGCACCGACGCCATTTTAGGCAAAGTAGGGTTT-GCCATGTACACGTTGAACGATTG 150510 | ||| | ||| | || ||| | ||| |||| |||| | | |||||||||||| Sbjct 3894 AAGTGAATCGAAGTCAATTTTC-CGTAGTTCGGTTCAGCCACATGAATGTTGAACGATTG 3952 Query 150511 ACTTTGATCGATAAATGCTCCCCTGTCTGCTGCCATTTCAATCATATATTTTCCATTGTT 150570 |||||||||||| || || ||||| || || ||||||| ||| | | || Sbjct 3953 ACTTTGATCGATGAACGCGCCCCTATCGGCAGCCATTTTAATGGTCGA----CC-----G 4003 Query 150571 CTCCCAAATTTCCCAGATTGTCATGTACAGCT----TTTTTAGATTGTCGGGAATTTTGG 150626 | || | || ||||| | ||| ||||||||| ||| |||| |||||| Sbjct 4004 CACCGATATCTCCCACACAGTCTTGTACAGCTCACGGATTT--CTTGT--GGAATTCGCT 4059 Query 150627 CGATAGAAGCT--ATCGATCCTCTGTTTGCCATGATTGTTTTTCGCATACTATTTGTATA 150684 |||| ||| || ||||||| | ||| |||||| || ||| || | Sbjct 4060 CGAT--TTGCTGGATTGATCCTCGTTGTGCGATGATTTCATTCTTCATGTCATCGTCCCA 4117 Query 150685 GAGATTTAATTTGATTAGATCATCGACCAAGTAGCGGTTGACAACTTGAAATTCGCCCGA 150744 | | || | | ||||| | | | || | ||||| | ||| || ||||| || Sbjct 4118 CAAGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTGATTGACGATTTGGAACTCGCCAGA 4177 Query 150745 CAAAACACGTCTCAAAAACAAATT-ACTGTGAAACGGTTCAAATGACTCGTTGTTGTTGA 150803 || ||||| || | | || |||| |||| ||||| || ||||||||| | Sbjct 4178 CAGGACACGCCTGTTGTAGATGTTCGATGTG-TACGGCTCAAACGATTCGTTGTTGCCAA 4236 Query 150804 GTATTTGTGCGGTCGTGGCCGTCGGCATGTACGCCACAAGCAATGAATTACGTAATCCGT 150863 | ||||| || || | || |||||||| || | || | || || | | |||| Sbjct 4237 GGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAGCGAGTTCCTAACACCGT 4296 Query 150864 ATTTTTGTATATTTATTTTCAACTGTGACCAGTCCCATAACGAAGTCGGTACCGTATTCC 150923 || || || |||| | ||| ||||| | ||| ||| || | |||| Sbjct 4297 GCTTAGCAATTTTCTCCTTCAGAGCAGCCCAATCCCACAGATCAGTTGGTTCCTTGTTCC 4356 Query 150924 ACAAATCGTATTGCAATATTCCTTCGCTCGCTTTGCTACCGGCAAACGTGCTATAAGGCT 150983 ||| ||||| || | |||||| | || | | ||| || | || || || Sbjct 4357 ACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCCTCATAGGTTTCGTATGGTC 4416 Query 150984 CA--CTAACAGATGCCAGTTCGTAACTGGCCTCGAGCGCAGCATGATACACAGTTTCAGC 151041 || || | |||||||| | || ||||| || || ||| || | ||||| Sbjct 4417 CAAGCTTCTCG--GCCAGTTCACAGCTTGCCTCTAGTGCTCCATAGTAGATGGTTTCGAA 4474 Query 151042 AATTTGTTTATTCAATAGAACGGCAGCATCGCTCACGTACGGTATGCGCAACATAACAAA 151101 ||||||| || | || | |||||| |||| || ||||| || || | Sbjct 4475 GATTTGTTGGTTGAGAAGTTGCGATTGTTCGCTCTCGTATGGATAGCGCATCAGAATGAG 4534 Query 151102 TGCATCGGCCAAACCTTGAATGCCTATGCCGATGGGACGATGGCGCATATTAGAtttttt 151161 ||| ||||| || ||||||| || || ||||| || || || || | || ||||| || Sbjct 4535 TGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTGTTTGATTTCTT 4594 Query 151162 tGCAGTTTCAATAGGGTAGAAATTGCGATCAATAATTTTATTCAA---ACTATTCACTAC 151218 || | || |||||||||||| ||||| ||||| ||||| | |||| | Sbjct 4595 CGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAGTTGCGGGTCACAAT 4654 Query 151219 ATGTTTGACCACAGTG-TGCAATAGTTGAAAATCAAA---AGTATCATTATTGATATATT 151274 | | |||| || | ||| || ||||| | |||| | ||| | Sbjct 4655 CTTTGTGAC----TTGCTTCAACTTCTGGAAATCGTACTTCTTATCGGGAGTGACGAACA 4710 Query 151275 TATTGACGGCAATCGACGCTAGATTACATACGGCAGTTTCGTCGGGCGCGCAATATTGTA 151334 | || | ||||| || || | || || || ||| | || || || ||| | || | | Sbjct 4711 TGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCGGAGTACTCGA 4770 Query 151335 CTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACTTTGATTGCTTTTGC 151394 | || || | || | ||| ||||| || || ||| || ||||||| |||| Sbjct 4771 CAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATGTTCTGTTGATTGGACTTGC 4830 Query 151395 GGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAATTTCTATAA 151454 |||||||||| || ||||| | ||||||||| || ||||| || ||||| |||||||| Sbjct 4831 GGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTGAGATTCTATAA 4890 Query 151455 TG 151456 || Sbjct 4891 TG 4892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487651210267200