Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_023688.1 Length=222006 Score E Sequences producing significant alignments: (Bits) Value seq146010 190 3e-43 >seq146010 Length=1781 Score = 190 bits (210), Expect = 3e-43 Identities = 604/927 (65%), Gaps = 32/927 (3%) Strand=Plus/Plus Query 28117 TCAAGAGCGATTCGCGGCAAGTTCAGAGTGACCACACCCAAGTTGTTACGGCCTTCATGA 28176 |||| || |||||||| ||||| | | | | ||||| || || || || || |||||| Sbjct 418 TCAATTGCAATTCGCGGTAAGTTTAAACTTATGACACCTAAATTATTTCGTCCGTCATGA 477 Query 28177 ACTTCAACACCGTTTTCGTCTTCCCAGCGATGCAAGAAA-CTACGGCATCCCATTGGGAA 28235 |||| || | ||| || | || ||||||| ||||||||||||||||| Sbjct 478 ACTTGCTTGCCATCTTCCTCATATACGC----CAAGAAAGCTACGGCATCCCATTGGCGT 533 Query 28236 TTTGAAACTACCAGTCACTTCAACGATCTTATCATAGCTCAGAATGTCCGGATACATACG 28295 |||||| ||| || || | || | ||||| || | | ||| || || |||||||| Sbjct 534 TTTGAATGAACCCGTTACCGCGACCACTTTATCGTAATTTAAAATATCGGGGTACATACG 593 Query 28296 TTTCGCAGCGCATTCCAGAGCCAACTGTTTGATACGATACAGCGGATCAGTCGGGTTCAA 28355 || || ||||| | || | | ||||||| ||| |||| || Sbjct 594 CTTACTTGCACATTCTAATGCGAGTTTTTTGATATCATAATTGATATCACCAACCTTATG 653 Query 28356 GTTGTGTCCGTCTTTCAGAGCGAATACCAGTTTCGGGAAAACAGGGGTGATACCCTCTTT 28415 || || ||||| | || || |||| ||| || ||||| | || | | || Sbjct 654 ATTAACGCCATCTTTTATTGCAAACACCAATTTTGGAAAAACTGCTGTTTTGTGGTTCTT 713 Query 28416 ACCAAGACCAGCCAAACGAACTTTCAGGATTGCTTCTTGAATCAGTTCTGACTCCCAGCT 28475 || | || ||||| | ||| | || | |||||| || ||| ||| ||||| || Sbjct 714 TCCTAATCCTTTTAAACGTATTTTTAAAATAGATTCTTGGATGAGTCGTGATTCCCAACT 773 Query 28476 AGTACCAAGACCAAAGCCGAAGGTACAGAACGGAGTTTGACCATTTGCGGAGTGCAGAGT 28535 |||| | |||||||| || ||| || || ||||||||||| |||| ||| || || Sbjct 774 TTTACCTAATCCAAAGCCAAATGTAACAAATGGCGTTTGACCATTAGCGGTGTGGAGTGT 833 Query 28536 GTTGACCTCATACTCCAGACCTTGCATAGCATCATATACAG-CTTT------GCGAGTCT 28588 ||| || || ||||| ||| ||| | |||||||| ||| |||| |||| | | Sbjct 834 GTTCACTTCGTACTCAAGAGATTGGAATGCATCATA-ACACTCTTTTTCAGTGCGATTTT 892 Query 28589 TTGCAATAGCATATTGCTGTTGATCTGGAATTTTCCAGTAACGAGCTTCATCCAAGTGCT 28648 ||||| || || | ||| | |||| ||| | || | | | || | Sbjct 893 TTGCA------TAGTGGTCAGGATTTTTTATTTGCCACTCTGTCGCGACTTGCTTATGTT 946 Query 28649 TTTCGTGTGTCATTTTAACATACGGTGCCAGCACTTCGTCAATGCGATTGATTGTGTTAC 28708 ||| | | || ||||| | ||| | | || || || ||||| ||||| | | Sbjct 947 TTTGATAACTGATACTAACAAATTTTGCTAATATCTCATCGATACGATTAATTGTCGTTC 1006 Query 28709 CGCCATAAATGTGACTTGCTACTTGAGCGATGATTTGAGCAATCACGGCAGCAGCGGTAG 28768 | || ||||| || ||||| || ||||| || |||||||| | || || | || || | Sbjct 1007 CACCGTAAATATGGCTTGCCACCTGAGCAATAATTTGAGCCGTGACCGCGGTTGCCGTTG 1066 Query 28769 AAATGCTTTTCGGAGTCTCGATTTGAGCATTACCCATTCTGAAACCACGTT--TCAACAT 28826 ||| ||| || | || |||| || || |||||| | ||||| ||| | | ||| Sbjct 1067 CAATAGATTTAGGCGGTTCAATTTCGGCGTTGCCCATTTTAAAACC--GTTGGTAAGCAT 1124 Query 28827 TCCTTCAACATCTATCAACATGCAGTTAAACATTGGGAAGAACGGTGAATAATCAAGATC 28886 || || | ||| || |||||||| ||||||||||| || || |||| |||||| | ||| Sbjct 1125 GCCATCTAGATCGATTAACATGCAATTAAACATTGGAAAAAATGGTGCATAATCCAAATC 1184 Query 28887 GTGGAAGTGAATCCAACCATTTTC--GTGTGCTTG-CATAACTTCAACAGGC---AGATA 28940 || | ||||| ||| || | | ||||| ||| ||| ||| ||||| Sbjct 1185 ATGATAATGAATTTCTCCACGGTCATGGGCGCTTGAAATATCTT---TTGGCAAAAGATA 1241 Query 28941 ATGCTTGGCGAAATGCTTACTAACGATACCAGCTACCAAATCGCGTTGAGTTGGAATTAC 29000 ||||| || |||| |||||||| |||| | ||| ||||| ||||| ||||| Sbjct 1242 CTGCTTCGCATAATGACGGGCGACGATACCCGCTAATAGATCCCGTTGTGTTGGGATTAC 1301 Query 29001 CTTGGCGTCTTTGTTTGCATTTTCATT 29027 || |||||| || ||||||||||| Sbjct 1302 TTTACTGTCTTTATTAGCATTTTCATT 1328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708993178346560