Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_023688.1
Length=222006
Score E
Sequences producing significant alignments: (Bits) Value
seq146010 190 3e-43
>seq146010
Length=1781
Score = 190 bits (210), Expect = 3e-43
Identities = 604/927 (65%), Gaps = 32/927 (3%)
Strand=Plus/Plus
Query 28117 TCAAGAGCGATTCGCGGCAAGTTCAGAGTGACCACACCCAAGTTGTTACGGCCTTCATGA 28176
|||| || |||||||| ||||| | | | | ||||| || || || || || ||||||
Sbjct 418 TCAATTGCAATTCGCGGTAAGTTTAAACTTATGACACCTAAATTATTTCGTCCGTCATGA 477
Query 28177 ACTTCAACACCGTTTTCGTCTTCCCAGCGATGCAAGAAA-CTACGGCATCCCATTGGGAA 28235
|||| || | ||| || | || ||||||| |||||||||||||||||
Sbjct 478 ACTTGCTTGCCATCTTCCTCATATACGC----CAAGAAAGCTACGGCATCCCATTGGCGT 533
Query 28236 TTTGAAACTACCAGTCACTTCAACGATCTTATCATAGCTCAGAATGTCCGGATACATACG 28295
|||||| ||| || || | || | ||||| || | | ||| || || ||||||||
Sbjct 534 TTTGAATGAACCCGTTACCGCGACCACTTTATCGTAATTTAAAATATCGGGGTACATACG 593
Query 28296 TTTCGCAGCGCATTCCAGAGCCAACTGTTTGATACGATACAGCGGATCAGTCGGGTTCAA 28355
|| || ||||| | || | | ||||||| ||| |||| ||
Sbjct 594 CTTACTTGCACATTCTAATGCGAGTTTTTTGATATCATAATTGATATCACCAACCTTATG 653
Query 28356 GTTGTGTCCGTCTTTCAGAGCGAATACCAGTTTCGGGAAAACAGGGGTGATACCCTCTTT 28415
|| || ||||| | || || |||| ||| || ||||| | || | | ||
Sbjct 654 ATTAACGCCATCTTTTATTGCAAACACCAATTTTGGAAAAACTGCTGTTTTGTGGTTCTT 713
Query 28416 ACCAAGACCAGCCAAACGAACTTTCAGGATTGCTTCTTGAATCAGTTCTGACTCCCAGCT 28475
|| | || ||||| | ||| | || | |||||| || ||| ||| ||||| ||
Sbjct 714 TCCTAATCCTTTTAAACGTATTTTTAAAATAGATTCTTGGATGAGTCGTGATTCCCAACT 773
Query 28476 AGTACCAAGACCAAAGCCGAAGGTACAGAACGGAGTTTGACCATTTGCGGAGTGCAGAGT 28535
|||| | |||||||| || ||| || || ||||||||||| |||| ||| || ||
Sbjct 774 TTTACCTAATCCAAAGCCAAATGTAACAAATGGCGTTTGACCATTAGCGGTGTGGAGTGT 833
Query 28536 GTTGACCTCATACTCCAGACCTTGCATAGCATCATATACAG-CTTT------GCGAGTCT 28588
||| || || ||||| ||| ||| | |||||||| ||| |||| |||| | |
Sbjct 834 GTTCACTTCGTACTCAAGAGATTGGAATGCATCATA-ACACTCTTTTTCAGTGCGATTTT 892
Query 28589 TTGCAATAGCATATTGCTGTTGATCTGGAATTTTCCAGTAACGAGCTTCATCCAAGTGCT 28648
||||| || || | ||| | |||| ||| | || | | | || |
Sbjct 893 TTGCA------TAGTGGTCAGGATTTTTTATTTGCCACTCTGTCGCGACTTGCTTATGTT 946
Query 28649 TTTCGTGTGTCATTTTAACATACGGTGCCAGCACTTCGTCAATGCGATTGATTGTGTTAC 28708
||| | | || ||||| | ||| | | || || || ||||| ||||| | |
Sbjct 947 TTTGATAACTGATACTAACAAATTTTGCTAATATCTCATCGATACGATTAATTGTCGTTC 1006
Query 28709 CGCCATAAATGTGACTTGCTACTTGAGCGATGATTTGAGCAATCACGGCAGCAGCGGTAG 28768
| || ||||| || ||||| || ||||| || |||||||| | || || | || || |
Sbjct 1007 CACCGTAAATATGGCTTGCCACCTGAGCAATAATTTGAGCCGTGACCGCGGTTGCCGTTG 1066
Query 28769 AAATGCTTTTCGGAGTCTCGATTTGAGCATTACCCATTCTGAAACCACGTT--TCAACAT 28826
||| ||| || | || |||| || || |||||| | ||||| ||| | | |||
Sbjct 1067 CAATAGATTTAGGCGGTTCAATTTCGGCGTTGCCCATTTTAAAACC--GTTGGTAAGCAT 1124
Query 28827 TCCTTCAACATCTATCAACATGCAGTTAAACATTGGGAAGAACGGTGAATAATCAAGATC 28886
|| || | ||| || |||||||| ||||||||||| || || |||| |||||| | |||
Sbjct 1125 GCCATCTAGATCGATTAACATGCAATTAAACATTGGAAAAAATGGTGCATAATCCAAATC 1184
Query 28887 GTGGAAGTGAATCCAACCATTTTC--GTGTGCTTG-CATAACTTCAACAGGC---AGATA 28940
|| | ||||| ||| || | | ||||| ||| ||| ||| |||||
Sbjct 1185 ATGATAATGAATTTCTCCACGGTCATGGGCGCTTGAAATATCTT---TTGGCAAAAGATA 1241
Query 28941 ATGCTTGGCGAAATGCTTACTAACGATACCAGCTACCAAATCGCGTTGAGTTGGAATTAC 29000
||||| || |||| |||||||| |||| | ||| ||||| ||||| |||||
Sbjct 1242 CTGCTTCGCATAATGACGGGCGACGATACCCGCTAATAGATCCCGTTGTGTTGGGATTAC 1301
Query 29001 CTTGGCGTCTTTGTTTGCATTTTCATT 29027
|| |||||| || |||||||||||
Sbjct 1302 TTTACTGTCTTTATTAGCATTTTCATT 1328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708993178346560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |