Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_024354.1 Length=149162 Score E Sequences producing significant alignments: (Bits) Value seq145875 98.7 9e-16 >seq145875 Length=1531 Score = 98.7 bits (108), Expect = 9e-16 Identities = 284/431 (66%), Gaps = 12/431 (3%) Strand=Plus/Minus Query 118890 ATGTCATCAAAGACGATCGACGGATCTGCCAGGATGTTACGGATGATATGGGTGTATGAG 118949 || ||||||||||| ||||| ||||| | ||||||||| || |||||||| || || Sbjct 1394 ATATCATCAAAGACAATCGATGGATCATTGACGATGTTACGAATAATATGGGTATAAGAT 1335 Query 118950 CGAGAGTGGATAGTCTCACTGAACGCCCAAGTCTCTACCCATGTTTCCAG----GGTTGT 119005 || ||||||||||| || || | ||| || || ||||| ||||| || ||| | Sbjct 1334 CGCGAGTGGATAGTTTCTGAAAATGACCACGTTTCAACCCAAGTTTCAAGCTCAGGTATT 1275 Query 119006 GTCGGACACGATCGGGAGCAGAACTGCGTTCGGCCCACGGCCCTGTACAGAATCCAGAAG 119065 || | | ||||||| | | ||||| | || || || | |||||||| | Sbjct 1274 ----GAAATTAAAGGGAGCAATGCGACATTCGGACTGCGTCCTTGAATCGAATCCAGTAA 1219 Query 119066 GATCTGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCA-TGT 119124 | || || || | ||| ||||| || || || || || || || || || | || | Sbjct 1218 AGTTTGATATTTTAAGTTACTGATAAAAATATGTTTTTCATGTTCAGGAAG-TCCAGCAT 1160 Query 119125 AGTCGATACGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCT 119184 | ||||| || || | | | | |||||||| || ||||| || || | | |||| Sbjct 1159 AATCGATTCGATCTTGTGAAATATCCACTTCTTCTGGCCGCCAAAAAAAAGATAACTGCT 1100 Query 119185 TCTCGATCAGCTTCTCGAACTTGGCGTGTTTCTGCTGGTCATAGCGAGAAACGTTCGGTG 119244 | || || || || || || | | | ||| || || ||||| || | ||| || | Sbjct 1099 TTTCAATTAGTTTTTCAAAAATTTCATATTTTTGTTGATCATAACGCGCAACATTAACCG 1040 Query 119245 TCTCGCCGAGGAACATCGGCTGAGTCAGGAAGTCGAATTTGTTCTGGT-TGAAAGTGCTG 119303 | || || |||||||| | |||| ||| | | ||| || || |||||| ||| Sbjct 1039 ATTGTCCAAGAAACATCGGTTCTTTCAGTTGGTC-ATTGTGTACTTGTGAGAAAGTACTG 981 Query 119304 TAAGACATTGT 119314 ||| ||| || Sbjct 980 TAATTCATGGT 970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476318358403520