Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq79726 324 1e-83 >seq79726 Length=8148 Score = 324 bits (358), Expect = 1e-83 Identities = 951/1442 (66%), Gaps = 30/1442 (2%) Strand=Plus/Plus Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGAC 148010 ||||| || ||||||||||| |||||||||||| ||| || || ||| | ||| Sbjct 3846 GTGCGTAGGTAGTACATGCCAGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAA 3905 Query 148011 GACATGAGCGTGTACGTCGGGTGCGGCACAAACAGATTAAACGACTGGCTCTGGTCAATG 148070 | || ||| |||| | | |||| | || ||||| || || || || ||| Sbjct 3906 GTCAATTTTCCGTAGTTCGGTTCAGCCACATGAATGTTGAACGATTGACTTTGATCGATG 3965 Query 148071 AACGCGCCACGGTCAGCGGCCATTTCAATGAGTCG-CTTTATCTTCATCTCCCAGGCCGT 148129 |||||||| | || || ||||||| |||| |||| | | | |||||||| | || Sbjct 3966 AACGCGCCCCTATCGGCAGCCATTTTAATG-GTCGACCGCACCGATATCTCCCACACAGT 4024 Query 148130 CTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGGTG 148189 |||||||||| ||| | | ||||| | ||||| |||| | || || || || Sbjct 4025 CTTGTACAGCTCACGGATTTCTTGTGGAATTCGCTCGATTTGCTGGATTGATCCTCGTTG 4084 Query 148190 CGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCATCGAT 148249 || | || | ||| ||| || || | | || | ||| | || || | | Sbjct 4085 TGCGATGATTTCATTCTTCATGTCATCGTCCCACAAGTCCAACTCAGTGAGATCCTTAAG 4144 Query 148250 CAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCT 148309 || | ||||| || | || |||||||| | || || |||| || | ||| Sbjct 4145 TAGGTGTTGATTGACGATTTGGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGA 4204 Query 148310 CGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCAT 148369 || |||| |||||||| ||||||||||| | || ||||| || | || || ||||| Sbjct 4205 TGTGTACGGCTCAAACGATTCGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCAT 4264 Query 148370 GTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGC 148429 || | ||| |||||||| | | |||| | || ||||| ||||||||| || Sbjct 4265 TGGAGCAATCAGGAGCGAGTTCCTAACACCGTGCTTAGCAATTTTCTCCTTCAGAGCAGC 4324 Query 148430 CCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCT 148489 ||| ||||| || | ||| | |||||||||||||||||| || || || || Sbjct 4325 CCAATCCCACAGATCAGTTGGTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACT 4384 Query 148490 AGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGC 148549 | |||| | ||||| || | ||| ||||| || | | |||||||| ||||| || Sbjct 4385 AACGGGACAACCCTCATAGGTTTCGTATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGC 4444 Query 148550 CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTC 148609 ||| || || || ||||| || || ||| ||||| |||||| || || || Sbjct 4445 CTCTAGTGCTCCATAGTAGATGGTTTCGAAGATTTGTTGGTTGAGAAGTTGCGATTGTTC 4504 Query 148610 GCTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGC 148668 ||| ||||| || ||| |||| | | | | |||||||| | || || || || | | Sbjct 4505 GCTCTCGTATGG-ATAGCGCATCAGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTC 4563 Query 148669 CAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGATAGTGGTTGCGG 148727 | || || |||||| |||| || ||| |||| | | || ||| ||| | Sbjct 4564 CGATTGGGCGGTGTCGTGTGTTTGATTTCTTCGC-CTCTGGCATTGGGTAGAAATTGACG 4622 Query 148728 TCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTGTAATTCTGC-GCAGCAATTCAA 148785 || || || ||| ||||| ||||| ||| | |||||| | | ||| || | | | Sbjct 4623 TCAATTATTTTGTTCAAG-TTGCGGGTCACAATCTTTGTGACT-TGCTTCAACTTCTGGA 4680 Query 148786 AATCGTACTTGTCATC------TACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGC 148839 |||||||||| | ||| |||| ||| ||||| || || || || | |||| Sbjct 4681 AATCGTACTTCTTATCGGGAGTGACGA-ACAT--GTTCAGCGCAATGGAAGCCAAGTTGC 4737 Query 148840 ACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATT 148899 | || || |||||||||| ||| |||||| || ||||| | ||| ||||| ||||| | Sbjct 4738 AAACAGCAATCTCATCCGGTGCGGAGTACTCGACAATCTCAGTGCAAAGATTACTGCACT 4797 Query 148900 TGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGT 148959 |||| ||| | ||||| ||||||| ||||| |||||| || || ||||| ||||||| Sbjct 4798 TGATGGTGCCGATGTTCTGTTGATTGGACTTGCGGTTGCAAGCATCTTTGTAGAGCATGT 4857 Query 148960 ACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG---AACCGATGCAGGTCCTGCGCGC 149016 |||| || || ||||| || | ||| | ||| |||| | || | | ||| | Sbjct 4858 ACGGAGTTCCGGTCTCCACTTGAGATTCTATAATGGCAAACCAAAGC-GTTTGTGCTTTC 4916 Query 149017 GCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCT 149076 || || ||| | | ||||||| |||||| || |||||| ||||||| || Sbjct 4917 ACAGTT-CTGTTTG-CCTTTCCCTCCTTCTCGTAACGGGTGTACAGCTCCTCGAACTTCT 4974 Query 149077 CGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGT 149136 | || || || | | |||||||||||| || |||||||| | ||||| |||||| Sbjct 4975 CCCCCCAGACTTCATGCAAACCGGGGCACTTATGTGGGCACATCAAAGACCAGTCGCCGT 5034 Query 149137 CCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCG 149196 | || | ||| |||||||| ||||||||||| | ||| || || || | | ||||| | Sbjct 5035 CGGCTTCCACTCGCTTCATGAACAGATCGGGAATCCATAGAGCATAGAACAAATCGCGAG 5094 Query 149197 CCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGT-TGAGCACGCTGAATATGTCCGCG 149255 | || || || || |||| || | || || | || ||||||| Sbjct 5095 CTCTGTTCTCCTCCTTTCCGGTGTTCTTCTTCAAATCCAAGAACTC-AAAGATGTCCGAA 5153 Query 149256 TGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTGCCG---CCCTGGTCGACG 149312 ||||| ||||| | ||| | |||| || || ||||||||| || |||||||| Sbjct 5154 TGCCAGGGCTCCAAGTAAATGGCGAAGGCACCTGGTCGCTTGCCGCCTCCTTGGTCGACA 5213 Query 149313 TGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTA 149372 | || | | |||||| ||| ||| | ||| || ||| ||| | | || ||||| Sbjct 5214 TACCGAGCGACGTTGTTGAACCCTCTCAGCATTGGAACAAGGCCGTTTGAGGTACCGTTT 5273 Query 149373 GT 149374 || Sbjct 5274 GT 5275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482537372659040