Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq117123 113 1e-19 seq73719 93.3 1e-13 >seq117123 Length=8748 Score = 113 bits (124), Expect = 1e-19 Identities = 220/318 (69%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 279821 GAACTGATCCATTTTTCTAATTATGATGTTCATCGTTCTATTCCTCATTTAATGGATGGT 279880 |||||||| | ||||| || |||| |||||| |||||| | | | |||||| Sbjct 3513 GAACTGATTCTCTTTTCCAACGCTGATAACGTTCGTTCAATTCCTTCTATGGTAGATGGT 3572 Query 279881 TTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGGTAAAGGAA 279940 || ||||| |||||||| |||| |||| ||||| || |||| | |||| || Sbjct 3573 TTCAAACCGGGCCAGCGTAAAGTTATGTTCACATGTTTTAAGCGAAAC--GATAAAAGAG 3630 Query 279941 A--TTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATG-CAGGTTATCATCACGGT 279997 | | |||||||||||| | || | ||| | ||| ||| | | ||||||||||| Sbjct 3631 AAGTAAAGGTTGCTCAGTTATCTGGATCTGTCGCCGAA-ATGTCTGCATATCATCACGGA 3689 Query 279998 GAAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTATGGCTTCAAACAAC 280057 |||| ||||| ||| ||||||| | | || || ||||| ||| ||||| ||| Sbjct 3690 GAAGTATCTCTACAAATGACTATTGTCAATATAGCACAGAATTTTGTGGGATCAAATAAC 3749 Query 280058 TTAAATCTGCTTTCACCAAATGGTCAATTTGGTTCTCGTATTCAC-AATGGAAAAGATCA 280116 | ||||| || |||| |||||| |||||| | | ||| || ||||||||| Sbjct 3750 ATTAATCTTCTGGAACCACGTGGTCAGTTTGGTACAAG-ATTAACTGGAGGAAAAGATAG 3808 Query 280117 TGGTAGTGCTCGTTACAT 280134 || |||||||||||| || Sbjct 3809 TGCTAGTGCTCGTTATAT 3826 >seq73719 Length=2947 Score = 93.3 bits (102), Expect = 1e-13 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 305334 TGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTAT 305393 |||| ||| | || ||| ||||||| ||| ||| ||| |||| ||| || || | Sbjct 1174 TGTTTAATCGACAGCCAAGTTTGCATAAGATGAGTATTATGTGTCATCAAGCTAAGGT-T 1232 Query 305394 TATCTGGATTG-ACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTT 305452 | | | | |||||||| || || | | |||| ||||| || ||||| || |||||| Sbjct 1233 CAGCCACAGCGTACATTTCGTTTCAACGAATGTGCATGTACACCCTATAACGCTGATTTT 1292 Query 305453 GATGGAGATGAAATGAATATGCATGTACCTCAA 305485 |||||||||||||||||| ||||| |||||||| Sbjct 1293 GATGGAGATGAAATGAATTTGCATTTACCTCAA 1325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1184589737922356