Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq79726 343 2e-89 >seq79726 Length=8148 Score = 343 bits (380), Expect = 2e-89 Identities = 959/1461 (66%), Gaps = 28/1461 (2%) Strand=Plus/Plus Query 68394 TGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAA 68453 ||| || ||||| ||||| |||||||| || || || || || |||| ||| |||| Sbjct 3836 TGCCGGCTTTGTGCGTAGGTAGTACATGCCAGTCTTGAGGCCCGCCTTCCAGCCGAAGAA 3895 Query 68454 ATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACT 68513 || || || | ||| || | || || || | |||||| || | ||||||||| Sbjct 3896 GTGAATCGAAGTCAATTTTCCGTAGTTCGGTTCAGCCACATGAATGTTGAACGATTGACT 3955 Query 68514 TTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTC 68573 |||||||||||| || || ||||| || |||||||| || | | | || || Sbjct 3956 TTGATCGATGAACGCGCCCCTATCGGCAGCCATTTTAATGGTCGACCGCACCGATATCTC 4015 Query 68574 CCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA--GGCTCGTATTT--TGAATGG 68629 ||| | |||||| | | || ||| || | ||||| ||||| |||| || || | Sbjct 4016 CCACACAGTCTTGTACAGCTCACGGATTTCTTGTGGAATTCGCTCG-ATTTGCTGGATTG 4074 Query 68630 ATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTA 68689 |||| | | | || ||| |||||| || ||||| | |||||| | ||| || | Sbjct 4075 ATCCTCGTTGTGCGATGATTTCATTCTTCATGTCATCGTCCCACAAGTCCAACTCAGTGA 4134 Query 68690 AAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGT 68749 | | |||| || || |||| || ||||| || || ||||| | || | | ||| Sbjct 4135 GATCCTTAAGTAGGTGTTGATTGACGATTTGGAACTCGCCAGACAGGACACGCCTGTTGT 4194 Query 68750 AAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATG 68809 | || || || || || || | ||||| || || || || ||||| || || || | Sbjct 4195 AGATGTTCGATGTGTACGGCTCAAACGATTCGTTGTTGCCAAGGATTTGCGCTGTAGAAG 4254 Query 68810 CAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTT 68869 | || ||||| || || | || | || |||| ||| || | ||||| || | Sbjct 4255 CTGTCGGCATTGGAGCAATCAGGAGCGAGTTCCTAACACCGTGCTTAGCAATTTTCTCCT 4314 Query 68870 TTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAA 68929 | ||| ||||||||| ||||||| |||| | ||||| | ||||| || || | Sbjct 4315 TCAGAGCAGCCCAATCCCACAGATCAGTTGGTTCCTTGTTCCACATGTCGTACTGAAGTA 4374 Query 68930 TTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTT 68989 |||| ||||| | | || | ||| ||||| || ||||| || || || |||| Sbjct 4375 TTCCCTTACTAACGGGACAACCCTCATAGGTTTCGTATGGTCCAAGCTTCTCGGCCAGTT 4434 Query 68990 CACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTT 69049 |||| |||||||||| ||| || || || || |||||||| || | | |||||| || Sbjct 4435 CACAGCTTGCCTCTAGTGCTCCATAGTAGATGGTTTCGAAGATTTGTTGGTTGAGAAGTT 4494 Query 69050 GTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAA 69109 | | || | || ||| ||||||| | | ||||| | ||| || || ||||| |||| Sbjct 4495 GCGATTGTTCGCTCTCGTATGGATAGCGCATCAGAATGAGTGCGTCGGCGAATCCTTGAA 4554 Query 69110 CCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAAT 69169 | || || ||||| || | |||| | ||||| | | || ||||| || || || Sbjct 4555 CACCGATTCCGATTGGGCGGTGTCGTGTGTTTGATTTCTTCGCCTCTGGCATTGGGTAGA 4614 Query 69170 AATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTT 69229 |||| | || || ||||| || | || ||| || | || || | ||| | | Sbjct 4615 AATTGACGTCAATTATTTTGTTCAAGTTGCGGGTCACAATCTTTGTGACTTGCTTCAACT 4674 Query 69230 TGAGAAAATCAAATCGTC-CATC---TATAACAAACATATTCAGTGCTACAGATGCTAGA 69285 | | ||||| | | || ||| | || ||||| ||||| || | || || | Sbjct 4675 TCTGGAAATCGTA-CTTCTTATCGGGAGTGACGAACATGTTCAGCGCAATGGAAGCCAAG 4733 Query 69286 TTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTA 69345 || ||||| || | ||||| | | || | | ||||| || || |||||||| Sbjct 4734 TTGCAAACAGCAATCTCATCCGGTGCGGAGTACTCGACAATCTCAGTGCAAAGATTACTG 4793 Query 69346 CATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGA 69405 || ||||| || || | || || ||||| ||| ||| || || || ||||| || Sbjct 4794 CACTTGATGGTGCCGATGTTCTGTTGATTGGACTTGCGGTTGCAAGCATCTTTGTAGAGC 4853 Query 69406 ATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCA 69465 || ||||||| || || || | |||||||| ||||| | ||| ||| ||| Sbjct 4854 ATGTACGGAGTTCCGGTCTCCACTTGAGATTCTATAATGG-----CAA---ACCAAAGCG 4905 Query 69466 TT-----TATTACGGTCTTGTAACGCTT---CTCTTTTTCATATTGTGTATATAGCCGTT 69517 || | | || || ||| ||| ||| || || || | || || ||| | Sbjct 4906 TTTGTGCTTTCACAGTTCTGTTTGCCTTTCCCTCCTTCTCGTAACGGGTGTACAGCTCCT 4965 Query 69518 CGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACC 69577 |||| | || ||||| || |||| ||| || || || | || ||| |||||||| |||| Sbjct 4966 CGAACTTCTCCCCCCAGACTTCATGCAAACCGGGGCACTTATGTGGGCACATCAAAGACC 5025 Query 69578 ACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAG 69636 | | | || | | ||||| ||||| || |||||||||||||| ||||| ||| || Sbjct 5026 AGTCGCCGTCGGCTTCCACTCGCTTCATGAACAGATCGGGAATCCATAGAGC-ATAGAAC 5084 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 | ||| | | ||| || || || ||||| || || || || | ||| | ||||| | Sbjct 5085 AAATCGCGAGCTCTGTTCTCCTCCTTTCCGGTGTTCTTCTTCAAATCCAAGAACTCAAAG 5144 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 || || |||||||| || || | || || || | | | || ||||| || ||||| Sbjct 5145 ATGTCCGAATGCCAGGGCTCCAAGTAAATGGCGAAGGCACCTGGTCGCTTGCCGCCTCCT 5204 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | || | || ||| || | |||||||||| |||| || || || || Sbjct 5205 TGGTCGACATACCGAGCGACGTTGTTGAACCCTCTCAGCATTGGAACAAGGCCGTTTGAG 5264 Query 69817 TTACCATTTGTTCCAGAAATA 69837 |||| |||||||||| |||| Sbjct 5265 GTACCGTTTGTTCCAGCAATA 5285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 685653508513440