Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq79726 343 2e-89
>seq79726
Length=8148
Score = 343 bits (380), Expect = 2e-89
Identities = 959/1461 (66%), Gaps = 28/1461 (2%)
Strand=Plus/Plus
Query 68394 TGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAA 68453
||| || ||||| ||||| |||||||| || || || || || |||| ||| ||||
Sbjct 3836 TGCCGGCTTTGTGCGTAGGTAGTACATGCCAGTCTTGAGGCCCGCCTTCCAGCCGAAGAA 3895
Query 68454 ATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACT 68513
|| || || | ||| || | || || || | |||||| || | |||||||||
Sbjct 3896 GTGAATCGAAGTCAATTTTCCGTAGTTCGGTTCAGCCACATGAATGTTGAACGATTGACT 3955
Query 68514 TTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTC 68573
|||||||||||| || || ||||| || |||||||| || | | | || ||
Sbjct 3956 TTGATCGATGAACGCGCCCCTATCGGCAGCCATTTTAATGGTCGACCGCACCGATATCTC 4015
Query 68574 CCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA--GGCTCGTATTT--TGAATGG 68629
||| | |||||| | | || ||| || | ||||| ||||| |||| || || |
Sbjct 4016 CCACACAGTCTTGTACAGCTCACGGATTTCTTGTGGAATTCGCTCG-ATTTGCTGGATTG 4074
Query 68630 ATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTA 68689
|||| | | | || ||| |||||| || ||||| | |||||| | ||| || |
Sbjct 4075 ATCCTCGTTGTGCGATGATTTCATTCTTCATGTCATCGTCCCACAAGTCCAACTCAGTGA 4134
Query 68690 AAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGT 68749
| | |||| || || |||| || ||||| || || ||||| | || | | |||
Sbjct 4135 GATCCTTAAGTAGGTGTTGATTGACGATTTGGAACTCGCCAGACAGGACACGCCTGTTGT 4194
Query 68750 AAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATG 68809
| || || || || || || | ||||| || || || || ||||| || || || |
Sbjct 4195 AGATGTTCGATGTGTACGGCTCAAACGATTCGTTGTTGCCAAGGATTTGCGCTGTAGAAG 4254
Query 68810 CAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTT 68869
| || ||||| || || | || | || |||| ||| || | ||||| || |
Sbjct 4255 CTGTCGGCATTGGAGCAATCAGGAGCGAGTTCCTAACACCGTGCTTAGCAATTTTCTCCT 4314
Query 68870 TTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAA 68929
| ||| ||||||||| ||||||| |||| | ||||| | ||||| || || |
Sbjct 4315 TCAGAGCAGCCCAATCCCACAGATCAGTTGGTTCCTTGTTCCACATGTCGTACTGAAGTA 4374
Query 68930 TTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTT 68989
|||| ||||| | | || | ||| ||||| || ||||| || || || ||||
Sbjct 4375 TTCCCTTACTAACGGGACAACCCTCATAGGTTTCGTATGGTCCAAGCTTCTCGGCCAGTT 4434
Query 68990 CACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTT 69049
|||| |||||||||| ||| || || || || |||||||| || | | |||||| ||
Sbjct 4435 CACAGCTTGCCTCTAGTGCTCCATAGTAGATGGTTTCGAAGATTTGTTGGTTGAGAAGTT 4494
Query 69050 GTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAA 69109
| | || | || ||| ||||||| | | ||||| | ||| || || ||||| ||||
Sbjct 4495 GCGATTGTTCGCTCTCGTATGGATAGCGCATCAGAATGAGTGCGTCGGCGAATCCTTGAA 4554
Query 69110 CCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAAT 69169
| || || ||||| || | |||| | ||||| | | || ||||| || || ||
Sbjct 4555 CACCGATTCCGATTGGGCGGTGTCGTGTGTTTGATTTCTTCGCCTCTGGCATTGGGTAGA 4614
Query 69170 AATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTT 69229
|||| | || || ||||| || | || ||| || | || || | ||| | |
Sbjct 4615 AATTGACGTCAATTATTTTGTTCAAGTTGCGGGTCACAATCTTTGTGACTTGCTTCAACT 4674
Query 69230 TGAGAAAATCAAATCGTC-CATC---TATAACAAACATATTCAGTGCTACAGATGCTAGA 69285
| | ||||| | | || ||| | || ||||| ||||| || | || || |
Sbjct 4675 TCTGGAAATCGTA-CTTCTTATCGGGAGTGACGAACATGTTCAGCGCAATGGAAGCCAAG 4733
Query 69286 TTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTA 69345
|| ||||| || | ||||| | | || | | ||||| || || ||||||||
Sbjct 4734 TTGCAAACAGCAATCTCATCCGGTGCGGAGTACTCGACAATCTCAGTGCAAAGATTACTG 4793
Query 69346 CATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGA 69405
|| ||||| || || | || || ||||| ||| ||| || || || ||||| ||
Sbjct 4794 CACTTGATGGTGCCGATGTTCTGTTGATTGGACTTGCGGTTGCAAGCATCTTTGTAGAGC 4853
Query 69406 ATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCA 69465
|| ||||||| || || || | |||||||| ||||| | ||| ||| |||
Sbjct 4854 ATGTACGGAGTTCCGGTCTCCACTTGAGATTCTATAATGG-----CAA---ACCAAAGCG 4905
Query 69466 TT-----TATTACGGTCTTGTAACGCTT---CTCTTTTTCATATTGTGTATATAGCCGTT 69517
|| | | || || ||| ||| ||| || || || | || || ||| |
Sbjct 4906 TTTGTGCTTTCACAGTTCTGTTTGCCTTTCCCTCCTTCTCGTAACGGGTGTACAGCTCCT 4965
Query 69518 CGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACC 69577
|||| | || ||||| || |||| ||| || || || | || ||| |||||||| ||||
Sbjct 4966 CGAACTTCTCCCCCCAGACTTCATGCAAACCGGGGCACTTATGTGGGCACATCAAAGACC 5025
Query 69578 ACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAG 69636
| | | || | | ||||| ||||| || |||||||||||||| ||||| ||| ||
Sbjct 5026 AGTCGCCGTCGGCTTCCACTCGCTTCATGAACAGATCGGGAATCCATAGAGC-ATAGAAC 5084
Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696
| ||| | | ||| || || || ||||| || || || || | ||| | ||||| |
Sbjct 5085 AAATCGCGAGCTCTGTTCTCCTCCTTTCCGGTGTTCTTCTTCAAATCCAAGAACTCAAAG 5144
Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756
|| || |||||||| || || | || || || | | | || ||||| || |||||
Sbjct 5145 ATGTCCGAATGCCAGGGCTCCAAGTAAATGGCGAAGGCACCTGGTCGCTTGCCGCCTCCT 5204
Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816
|| || | || | || ||| || | |||||||||| |||| || || || ||
Sbjct 5205 TGGTCGACATACCGAGCGACGTTGTTGAACCCTCTCAGCATTGGAACAAGGCCGTTTGAG 5264
Query 69817 TTACCATTTGTTCCAGAAATA 69837
|||| |||||||||| ||||
Sbjct 5265 GTACCGTTTGTTCCAGCAATA 5285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 685653508513440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |