Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq145875 100 3e-16 seq146010 87.8 2e-12 seq123113 86.0 7e-12 >seq145875 Length=1531 Score = 100 bits (110), Expect = 3e-16 Identities = 255/379 (67%), Gaps = 18/379 (5%) Strand=Plus/Minus Query 141934 CTGAACCATCGCGGGTGTTATGGTAATACAAAGTCTTACCACCGAAGA-ACCAGAAGTAA 141992 ||| |||||| || || ||||| ||||| | || || ||| | | || |||| Sbjct 823 CTGCACCATCTCGAGTATTATGATAATAAAGCGTTTTTATGCCGTATTTATAAGCTGTAA 764 Query 141993 ATCAAGTCTTCAAGCATCTGAGCCATCGAAACTTTACCTTTAGCAAAGTTCTGCGGATCG 142052 | |||||| |||| | ||| ||| | |||||| | || | ||| || |||||| Sbjct 763 GT-AAGTCTGCAAGTAACTGTTTCATAGGTACTTTATCATTGGTAAATTTTGTTGGATCG 705 Query 142053 TAGTAAGTATTCGCTGAAGCTGATTGACAAAGCCACTTTGTCATAATAGCAACTTGAGTC 142112 || | |||||| |||||| |||||| || | || ||| ||| |||| | | Sbjct 704 TAATTAGTATTGGCTGAAATCGATTGATCAATAAATTTCTGCATGATACCAACAAGTTGC 645 Query 142113 AAGTAACCTTTATTACCACGTTTAGCCATCAGCCAAGCATAAT-CGTA-AAGTTCAGCAT 142170 ||||| || | |||| |||| || |||| ||||| |||| || || | Sbjct 644 AAGTACCCGTGATTA------TTAGGAATTTGCCATA-ATAATTCGTAGAAATTT----T 596 Query 142171 TATGCTCA--ATATTC-GGAACTACCTGGCGGAAAGAACCTTCTTTAGATTCTTTAATAC 142227 || ||||| ||| || ||||| || || || ||| || ||||| ||| |||| | | Sbjct 595 TAAGCTCATGATAATCAGGAACAACTTGACGTAAAATGCCATCTTTCGATGCTTTTACGC 536 Query 142228 TTACAGGACCTCGAGGCGGTTCAATACCATTCGTGGAGTTCGAAACTTGGCTAGATGATT 142287 | ||| ||||||||||||||| || ||||| || | || |||| ||| ||| | || Sbjct 535 TGACATAACCTCGAGGCGGTTCGATTCCATTAGTCGCATTAGAAATTTGTGAAGACGTTT 476 Query 142288 CACACGGCATGAGCGCTGA 142306 | ||||||||||||| || Sbjct 475 CCGACGGCATGAGCGCAGA 457 >seq146010 Length=1781 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 39880 AAATGTAGTTCCGCCATATTGATGAGAAGCCACTTGAGCCGTAATTTGAGCCATAATAGC 39939 || ||| ||||| || || ||| ||||| ||||| ||||||||||| | | || Sbjct 996 AATTGTCGTTCCACCGTAAATATGGCTTGCCACCTGAGCAATAATTTGAGCCGTGACCGC 1055 Query 39940 GGTTGCTACTCCAATTGACTTTGGAGTCTCAATTTGAGCATTACCGAGTTTAAATCCGTT 39999 |||||| | |||| || || || | ||||||| || || || | |||||| ||||| Sbjct 1056 GGTTGCCGTTGCAATAGATTTAGGCGGTTCAATTTCGGCGTTGCCCATTTTAAAACCGTT 1115 Query 40000 ATTAAGCATTCCCTTCAAATCAACTAAACAGCAGTTAGTGAATGGAAGAGCTGGAGAATA 40059 ||||||| || | | ||| | ||| ||| ||| | ||||| | ||| | ||| Sbjct 1116 GGTAAGCATGCCATCTAGATCGATTAACATGCAATTAAACATTGGAAAAAATGGTGCATA 1175 Query 40060 GTCTAAGTCATGAAAATGAAT 40080 || || |||||| ||||||| Sbjct 1176 ATCCAAATCATGATAATGAAT 1196 >seq123113 Length=2487 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39890 CCGCCATATTGATGAGAAGCCACTTGAGCCGTAATTTGAGCCATAATAGCGGTTGCTACT 39949 || |||||||| ||||| || | ||| ||||||| | | ||| ||||| | Sbjct 2303 CCACCATATTGTAATGAAGCAACATTAGCAATAATTTGTGAAACTTGAGCAGTTGCAGTT 2244 Query 39950 CCAATTGACTTTGGAGTCTCAATTTGAGCATTACCGAGTTTAAATCCGTTATTAAGCATT 40009 ||| || |||| | || || ||||||||| | |||||| || ||| | | |||| Sbjct 2243 TGAATGGAACGGGGAGATTTAACTTCAGCATTACCAATTTTAAAACCATTAGTGAACATT 2184 Query 40010 CCCTTCAAATCAACTAAACAGCAGTTAGTGAATGGAAGAGCTGGAGAATAGTCTAAGTCA 40069 | || ||||||||||||||||| | || |||| ||| || ||||||| || ||| Sbjct 2183 TCTTTAAAATCAACTAAACAGCAATACGTTTCTGGAGTAGCGGGGTAATAGTCCAAATCA 2124 Query 40070 TGAAAATGAATA 40081 || |||||||| Sbjct 2123 TGCCAATGAATA 2112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543967307000160