Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_027335.1 Length=145518 Score E Sequences producing significant alignments: (Bits) Value seq21678 132 4e-26 seq73487 113 4e-20 >seq21678 Length=5369 Score = 132 bits (146), Expect = 4e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 89510 TTAGTACCAACCATTTGCTAACCAGAAAGATTTTGCGTTCTCCCATGAGCCATAGCGACC 89569 ||| |||||||||||| | |||||||||||| || || |||||||| ||||| || Sbjct 1506 TTAATACCAACCATTTTGTTGCCAGAAAGATTTAGCATTGTCCCATGAACCATAACGTGA 1565 Query 89570 TGCTACATACTCATCAGCTACTCGTTCTTGGTTGGCAGGTGAATAGTCACCATTTAAATA 89629 | ||||| | ||||||| || ||||||||| || | |||||||| || ||||| | Sbjct 1566 TTGAACATATTGATCAGCTGTTCTTTCTTGGTTAGCTGCAGAATAGTCCCCGTTTAATGA 1625 Query 89630 AGAGGCAGATAATTGGTAACGACCAATATACTGACCATTTGTTGCATCATAAGAACCACT 89689 || |||| ||| || |||| ||| || ||||||| ||| |||| |||||||| Sbjct 1626 AGCTTTGGATATTTGATATTTACCATAATATTGTCCATTTGATGCTCCATATGAACCACT 1685 Query 89690 AGATTCACGTTGTGCAATCCACTCTTTTGCTGA 89722 ||||| | ||||||||| ||||| || || Sbjct 1686 TGATTCGTGAGATGCAATCCAATCTTTAGCAGA 1718 >seq73487 Length=2939 Score = 113 bits (124), Expect = 4e-20 Identities = 186/266 (70%), Gaps = 12/266 (5%) Strand=Plus/Plus Query 108495 ACTCGGGACTTAACTTTATTAAGACATTATGCATGGAAAAAAGGTATAAAAACAATTTAT 108554 ||||| || |||| | | |||||| |||||||| || ||||||||| || | ||| Sbjct 2055 ACTCGTGATTTAAATATTTTAAGAAATTATGCACATGCAATGGGTATAAAATCATTGTAT 2114 Query 108555 TATGTTAGAACATTCACCGAAGAAGACGGAAGCGAAGTAGGGGTTTCAGAGTGTGAAAGT 108614 ||||| ||||||| ||| || || || | ||||| || ||| |||||||||||| Sbjct 2115 TATGTAAGAACATACACTGATGATAACCAA---GAAGTTGGTGTTAATGAGTGTGAAAGT 2171 Query 108615 TGTACAAT-----TTAAGGAGATGAGCACATGAATTTGCAAGAAAAGTATGAAGGAATTA 108669 || |||| ||||| | | |||| | || || || || ||| ||| ||| | Sbjct 2172 TGCTCAATCTAATTTAAGTA-AGGAGCTAAGTAAGATG---GATAATTATAAAGCAATCA 2227 Query 108670 ACTGGAATAAGATTGATGATGTAATTGACCAAGCCACATGGAAAAAGCTTACTGAGCAAT 108729 | |||||| || |||| |||||| |||| || ||| |||| | ||||| |||| Sbjct 2228 ATTGGAATGCTGTTAGTGATCAAATTGATAAAGCAACTTGGGAAAAATTAACTGAACAAT 2287 Query 108730 TTTGGTTGGACACACGTGTCCCTGTA 108755 ||||||| || || ||| | ||| || Sbjct 2288 TTTGGTTAGATACCCGTATTCCTTTA 2313 Score = 86.0 bits (94), Expect = 6e-12 Identities = 176/262 (67%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 108117 CCTAATGTAAAAGATTGGGAAACATTAAGAAACAGTATTATTGAAGGTGGTCTATACCAT 108176 || |||| ||| |||||| | ||||| || | |||| ||| |||| | || ||| Sbjct 1399 CCAAATGAAAATGATTGGAATGAATTAAAGAAATCTGTTATGAAAGATGGTATCTATCAT 1458 Query 108177 CAAAACCGTTTAGCTGTGGCTCCAAATGGTAGTATTGCTTATGTTAATGAGACTACTTCT 108236 |||||| | ||||| || ||||| |||||| ||| | || ||||||| | || || Sbjct 1459 CAAAACAGATTAGCAGTTGCTCCTAATGGTTCCATTTCATACATTAATGATTCAACAGCT 1518 Query 108237 TCATTGCACCCAATTATCTCTATGATTGAAGAACGTCAAGATGGGAAAACAGGTAAAACT 108296 | || || ||||| || |||||||| | | || || || ||||||| Sbjct 1519 AGTCTTCATCCTATTATTAGTAAAGTTGAAGAAAGATATGAATCCAAGACTGGTAAAATC 1578 Query 108297 TATTACCCTGCACCCCGGTTATCTGAGAAGACAATTCCATATTACAAGTCAGCGTACAAT 108356 ||||||||||| || |||||| | | ||| | ||||||||| ||||| || || Sbjct 1579 TATTACCCTGCTCCATACTTATCTAATGAAACATTAAAATATTACAAATCAGCATATGAT 1638 Query 108357 ACAAGTATGATTGACGTAATCA 108378 | |||| | | ||||||| Sbjct 1639 ATTGATATGCGTAAAGTAATCA 1660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 464678867932480