Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_027399.1 Length=346602 Score E Sequences producing significant alignments: (Bits) Value seq145105 95.1 3e-14 seq145812 89.7 1e-12 >seq145105 Length=1104 Score = 95.1 bits (104), Expect = 3e-14 Identities = 252/381 (66%), Gaps = 18/381 (5%) Strand=Plus/Plus Query 48350 TGGTGATGCAGGAGTCGGTAAAACTCAGATCGTCGATGGTTTTGCACAAGCCATTGCTGA 48409 |||||| | || || ||||||||| ||| ||||| || |||| || |||| | Sbjct 699 TGGTGAACCGGGTGTTGGTAAAACTGCGATTGTCGAAGGACTTGCTCAGCGAATTGTAAA 758 Query 48410 TGGTGACGTACCTGACTATCTGAAAGGTGTTGAG---GTATTATCTCTTAACGTTTCTGC 48466 ||| || || ||||| ||| | || | | || ||||| || || | || Sbjct 759 TGGCGAAGTGCCTGAAGGTCT---ACGTAATAAACGAGTTTTATCACTCGACATGGGCGC 815 Query 48467 TGTAACTGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAA 48526 | | ||||||| | |||||||| |||||||||||||||||| | ||| || |||| Sbjct 816 ACTTATTGCTGGTGCTAAATACCGGGGTGAATTCGAAGAACGTTTAAAAGCGGTTCTTAA 875 Query 48527 AGAACTT---AAAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGAT 48583 ||| ||| ||| || || | || || || || ||||| ||| | |||| ||| | Sbjct 876 AGATCTTTCAAAAGAAGAAGGACGCGTCATCTTATTTATTGACGAAATTCATACCATGGT 935 Query 48584 GGGTGCTGGTGGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACT 48643 ||||| || | | ||| | |||||| | | || || |||||||||| || Sbjct 936 TGGTGC---GGGCAAAGGTGATGGTGCAATGGATGCGGGTAACATGTTGAAACCTGCTCT 992 Query 48644 TTCACGTGGTGATATTC---GTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAA 48700 | | | ||||| ||| ||||| |||||||| || ||| ||||| ||||| Sbjct 993 TGCGAGAGGTGAACTTCACTGTGTT---GGTGCAACTACACTTGATGAATACCGCCAATT 1049 Query 48701 CATTGAAAAAGATGCTGCATT 48721 || || |||||||| || || Sbjct 1050 TATAGAGAAAGATGCCGCTTT 1070 >seq145812 Length=1452 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 178961 GTCCCCTTAGTTCAGTTGGATAGAACAACTGCCTTCTAAGCAGTAGGTCACTGGTTCGAG 179020 ||| |||||| |||| |||||||| |||| ||||||||||| ||||||||| ||||||| Sbjct 78 GTCTCCTTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAA 19 Query 179021 TCCAGTAGGGGA 179032 ||| |||||||| Sbjct 18 TCCTGTAGGGGA 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106917900889804