Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq25219 104 7e-17 seq79726 98.7 3e-15 >seq25219 Length=1370 Score = 104 bits (114), Expect = 7e-17 Identities = 112/147 (76%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 443718 GCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTT 443777 || ||||||| || ||||| | || || ||||||||||| || || ||||||||| | Sbjct 251 GCATTTGCTGCAGTTGAAGGGATTTTCTTCAGCGGCAGCTTC-GCATCAATCTTCTGGCT 309 Query 443778 GAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGA 443837 ||| ||||| || || |||| |||||| || || ||||| ||||| || ||||| Sbjct 310 GAAGAAGCGCGGTCTCATGCCCGGTCTTACATTCTCCAACGAGCTGATTTCACGCGACGA 369 Query 443838 GGGTTTGCATTGCGACTTCGCCTGTCT 443864 ||| | |||||||||||||| ||||| Sbjct 370 GGGACTCCATTGCGACTTCGCTTGTCT 396 >seq79726 Length=8148 Score = 98.7 bits (108), Expect = 3e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 |||| || | |||||| | | | |||||||||||| ||||| || ||||| ||||| || Sbjct 5258 CGGCCTTGTTCCAATGCTGAGAGGGTTCAACAACGTCGCTCGGTATGTCGACCAAGGAGG 5199 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084 |||||| || ||||| || ||| |||| ||| ||||||| ||||| | ||||| Sbjct 5198 CGGCAAGCGACCAGGTGCCTTCGCCATTTACTTGGAGCCCTGGCATTCGGACAT 5145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1585360830261220