Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_027996.1 Length=175720 Score E Sequences producing significant alignments: (Bits) Value seq145759 102 9e-17 seq145812 86.0 7e-12 >seq145759 Length=1407 Score = 102 bits (112), Expect = 9e-17 Identities = 141/196 (72%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 8904 GGAAGTGGCACTACTCTAGCCGTTGCTCATAAAATGAAACGCAAATGGATAGGCATAGAA 8963 || |||||||| || ||| ||||||||||||||| || | || || || || Sbjct 741 GGTAGTGGCACGACCGCAGCAGTTGCTCATAAAATGGGGCGTCGTTATATTGGTATTGAG 800 Query 8964 CAAATGGATTATATAGAAACTATCACAAAAGAAAGACTCaaaaaaaGTCATAGAAGGTGA 9023 || ||||||||||| | ||| || | | | || | ||||||| || |||||||| Sbjct 801 CAGATGGATTATATTAATGATATTACTGTACCACG-CTTACAAAAAGTAATTGAAGGTGA 859 Query 9024 GCAAGGTGGTATCAGCAAAGCAATAAATTGGCAAGGTGGTGGAAATTTTGTTTATGCTGA 9083 |||||||||||| |||| |||| |||||||| ||||||| ||||||||||| || Sbjct 860 GCAAGGTGGTATATCTAAAGATGTAAACTGGCAAGGCGGTGGAAGCTTTGTTTATGCGGA 919 Query 9084 ACTTATGCCTTTAAAT 9099 || | | |||||| Sbjct 920 GCTAAAGGAGTTAAAT 935 >seq145812 Length=1452 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 112374 TAGCTCAGCTGGATAGAGCGACAGCCTTCTAAGCCGTAGGTCAAAGGTTCGAGTCCT 112430 ||||||||||||||||||| || |||||||||||||||||||| |||||||| |||| Sbjct 71 TAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAATCCT 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561148651468800