Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq79726 165 1e-35 >seq79726 Length=8148 Score = 165 bits (182), Expect = 1e-35 Identities = 584/895 (65%), Gaps = 23/895 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||| | |||||| || ||||| |||| || || || | |||||| || || || Sbjct 4193 GTAGATGTTCGATGTGTACGGCTCAAACGATTCGTTGTTGCCAAGGATTTGCGCTGTAGA 4252 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 ||||| |||||||| || |||| || ||| | || ||| | || || || Sbjct 4253 AGCTGTCGGCATTGGAGCAATCAGGAGCGAGTTCCTAACACCGTGCTTAGCAATTTTCTC 4312 Query 110827 CTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884 ||| ||| || |||| || | | | || |||||| | |||| ||||||| ||||| Sbjct 4313 CTTCAGAGCAGCCCAATCCCACAGATCAG-TTGGTTCCTTGTTCC-ACATGTCGTACTGA 4370 Query 110885 AGCAC-CCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 || | ||||| | ||||| |||||||| ||||||| || | || | || || Sbjct 4371 AGTATTCCCTTACTAA-CGGGACAACCCTCATAGGTTTCGTATGGTCCAAGCTTCTCGGC 4429 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 || ||||||||| ||||| || | | | | || |||||||| ||||| | || | Sbjct 4430 CAGTTCACAGCTTGCCTCTAGTGCTCCATAGTAGATGGTTTCGAAGATTTGTTGGTTGAG 4489 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 111063 | | || || || ||| ||||| || ||| | | | || |||| || Sbjct 4490 AAGTTGCGATTGTTCGCTCTCGTATGGATAGCGCATCAGAATGAGTGCGTCGGCGAATCC 4549 Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT--CAACG 111121 ||||||||| | || || || | |||||| | || || || ||| ||| || | Sbjct 4550 TTGAACACCGATTCCGATTGGGCGGTGTCGTGTGTTTGATTTCTTCGCC-TCTGGCATTG 4608 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT-C 111180 || || ||||| |||||| | | ||| | || ||| ||||||||||||| || | Sbjct 4609 GG-TAGAAATTGACGTCAATTATTTTGTTCAAGTTGCGGGTCACAATCTTTGTGACTTGC 4667 Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTC---ATTGACATACTTTGGAAGGGC 111237 | || || | | |||| || | ||| || | |||| || | || || Sbjct 4668 TTCAACTTCTGGA-AATC----GTACT--TCTTATCGGGAGTGACGAACATGTTCAGCGC 4720 Query 111238 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 111297 || || ||||| ||||||||||| |||||||| | | |||||| | ||| || || Sbjct 4721 AATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCGGAGTACTCGACAATCTCAGT 4780 Query 111298 ACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGC 111357 || | || | ||| || || || | |||| ||| || ||| |||||| || Sbjct 4781 GCAAAGATTACTGCACTTGATGGTGCCGATGTTCTGTTGATTGGACTTGCGGTTGCAAGC 4840 Query 111358 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 ||| |||||||||||||| || || || |||||| || |||| | ||| || ||| Sbjct 4841 ATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTGAGATTCTATAATGGCAAACCA 4900 Query 111418 AA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGA 111476 || | | | ||| ||| | ||| ||| ||||||| |||||| ||||| | Sbjct 4901 AAGCGTTTG-TGCTTTCACAGTTCTGTTTGCCTTTCCCTCCTTCTCGTAACGGGTGTACA 4959 Query 111477 GGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAA 111536 | | || |||| ||| ||| | || | ||| || ||| | ||| || | | Sbjct 4960 GCTCCTCGAACTTCTCCCCCCAGACTTCATGCAAACCGGGGCACTTATGTGGGCACATCA 5019 Query 111537 GAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591 |||||| | || | | || || ||||||||||| || || |||||||| || Sbjct 5020 AAGACCAGTCGCCGTCGGCTTCCACTCGCTTCATGAACAGATCGGGAATCCATAG 5074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626884302921600