Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq79726 122 1e-22 >seq79726 Length=8148 Score = 122 bits (134), Expect = 1e-22 Identities = 814/1283 (63%), Gaps = 59/1283 (5%) Strand=Plus/Plus Query 117830 CTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCAT 117889 ||||| || ||||||||||| || |||||||| ||| ||||||| | | | || || Sbjct 3842 CTTTGTGCGTAGGTAGTACATGCCAGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAAT 3901 Query 117890 TGAGGACAACTTGGAGAGGGTTGGACTTTC-----CATGAAGAGGTTCATACTTTGGGAT 117944 || | ||| || | | | || ||| |||||| ||| | ||| | Sbjct 3902 CGAAGTCAATTTTCCGTAGTTCGG---TTCAGCCACATGAAT--GTTGAACGATTGACTT 3956 Query 117945 TGATCGATGAA-GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTC 118003 ||||||||||| ||| |||| ||| || ||||| | ||| | || | || || Sbjct 3957 TGATCGATGAACGCG-CCCCTATCGGCAGCCATTTTAATGGTCGACCGCACCGATATCTC 4015 Query 118004 CCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGA 118063 |||||||||| |||| || | || || | ||| || | |||| | ||||| || Sbjct 4016 CCACACAGTCTTGTACAGCTCACGGATTTCTTGTGGAATTCGCTCGATTTGCTGGATTGA 4075 Query 118064 TCCACCCGCCTTGACCATGAGATC---CTTCATATCCTTTGACCAGA-GACCAATCTTTT 118119 ||| | | || | |||| || |||||| || | ||| | | |||| || Sbjct 4076 TCCTC--GTTGTG-CGATGATTTCATTCTTCATGTCATCGTCCCACAAGTCCAA-CTCAG 4131 Query 118120 TGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCA 118179 ||||||||| | || || | |||||| | ||||| || | ||| || || Sbjct 4132 TGAGATCCTTAAGTAGGTGTTGATTGACGATTTGGAACTCGCCAGACAGGACACGCCTGT 4191 Query 118180 GATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGG 118239 ||||| || | ||||| |||||||| | || ||||| || | |||||| ||||| | Sbjct 4192 TGTAGATGTTCGATGTGTACGGCTCAAACGATTCGTTGTTGCCAAGGATTTGCGCTGTAG 4251 Query 118240 AGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTT 118299 | ||||| ||||| || || || || || ||| | | ||| | | ||| | Sbjct 4252 AAGCTGTCGGCATTGGAGCAATCAGGAGCGAGTTCCTAACACCGTGCTTAGCAATTTTCT 4311 Query 118300 CCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTG 118357 |||| ||||| |||| || | | | || ||| ||| | |||||| || |||| Sbjct 4312 CCTTCAGAGCAGCCCAATCCCACAGATCAG--TTGGTTCCTTGTTCCACATGTCGTACTG 4369 Query 118358 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 118417 || || || | | || | |||||| | || || ||||| || ||| || Sbjct 4370 AAGTATTCCCTTACTAACGGGACAACCCTCATAGGTTTCGTATGGTCCAAGCTTCTCGGC 4429 Query 118418 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA- 118476 || ||| |||| ||||| || ||| | | || || ||||| || || | || | Sbjct 4430 CAGTTCACAGCTTGCCTCTAGTGCTCCATAGTAGATGGTTTCGAAGATTTGTTGGTTGAG 4489 Query 118477 ---TTGCC----TTGGC-CTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATC 118528 |||| || || ||||| | || ||| || | ||| | | | || Sbjct 4490 AAGTTGCGATTGTTCGCTCTCGTATGGATA----GCGCATCAG-----AATGAGTGCGTC 4540 Query 118529 CGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGT 118588 |||| ||||| ||||||| || |||||||| |||| | || || ||| || | Sbjct 4541 GGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGTGTGTTTGATTTCTTCGCC-T 4599 Query 118589 CTC-CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 118647 || || || || ||||| || || | | || | || ||| |||| ||||| Sbjct 4600 CTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAGTTGCGGGTCACAATCTTTG 4659 Query 118648 TGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAA 118707 ||| || | | ||| | | |||| | || | | || | |||| || | | Sbjct 4660 TGACTTGCTTCAACTTCTGGAAATCGTA-CTTCT--TATCGGGAGTGACGAACATGTTCA 4716 Query 118708 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 118767 | || || || |||| || || |||| |||||||| | | |||||| | ||| | Sbjct 4717 GCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCGGAGTACTCGACAATCT 4776 Query 118768 CCGTGCACAAGTTTGAACT---CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 118824 | ||||| ||| || ||| ||| |||||||| | ||||| |||||| ||||| || Sbjct 4777 CAGTGCA-AAGATT--ACTGCACTTGATGGTGCCGATGTTCTGTTGATTGGACTTGCGGT 4833 Query 118825 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 118884 | || ||||| ||||| |||||||| || || || |||||| ||| || | | ||| | Sbjct 4834 TGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTGAGATTCTATAATGG 4893 Query 118885 CCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 | ||| | | | | ||| |||||| ||| || ||||| | |||||| Sbjct 4894 CAAACCAAAGCGTTTGT-GCTTTCACAGTTCTGTTTGCCTTTCCCTCCTTCTCGTAACGG 4952 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTC-TGAGAGCCCTGGTGC-CTTATCTG 119001 ||||| || | || |||| || ||| | | || || | || || || ||||| || Sbjct 4953 GTGTACAGCTCCTCGAACTTCTCCCCCCAGACTTCATGCAAACC--GGGGCACTTATGTG 5010 Query 119002 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 119061 |||| | | |||||| | || | | || || ||||||||||| || || || |||| Sbjct 5011 GGCACATCAAAGACCAGTCGCCGTCGGCTTCCACTCGCTTCATGAACAGATCGGGAATCC 5070 Query 119062 AGAGCGCCGAGAAGAGATCCCGA 119084 | || || |||| | ||| ||| Sbjct 5071 ATAGAGCATAGAACAAATCGCGA 5093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617305040593760