Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq79726 140 4e-28
seq25219 89.7 6e-13
>seq79726
Length=8148
Score = 140 bits (154), Expect = 4e-28
Identities = 628/980 (64%), Gaps = 15/980 (2%)
Strand=Plus/Minus
Query 104624 GAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAG 104683
||||| ||||| |||| ||| | |||||| | || ||| ||| || | |||
Sbjct 5164 GAGCCCTGGCATTCGGACATCTTTGAGTTCTTGGATTTGAAGAAGAACACCGGAAAGGAG 5105
Query 104684 GAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAG 104742
||| | | || |||||| | |||| ||||| |||||||| ||||| ||||||||| |
Sbjct 5104 GAGAA-CAGAGCTCGCGATTTGTTCTATGCTCTATGGATTCCCGATCTGTTCATGAAGCG 5046
Query 104743 AGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA 104802
||| || | ||| | |||||| | | || ||| | ||| || ||| | ||
Sbjct 5045 AGTGGAAGCCGACGGCGACTGGTCTTTGATGTGCCCACATAAGTGCCCCGGTTTGCATGA 4986
Query 104803 TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGAC 104862
| | ||| ||| |||| || | || ||||| |||||| | || || ||| |
Sbjct 4985 AGTCTGGGGGGAGAAGTTCGAGGAGCTGTACACCCGTTACGAGAAGGAGGGAAAGGCAAA 4926
Query 104863 TGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921
|| ||| ||| | | | | ||| || ||| | | |||||| ||||| |
Sbjct 4925 CAGAACTGTGAAAGCA-CAAACGCTTTGGTTTGCCATTATAGAATCTCAAGTGGAGACCG 4867
Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981
| || || |||||||| |||||||| || || |||| ||| |||||| |||| | |
Sbjct 4866 GAACTCCGTACATGCTCTACAAAGATGCTTGCAACCGCAAGTCCAATCAACAGAACATCG 4807
Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 105041
| |||||| | ||||| || || || || | || | | | |||||||
Sbjct 4806 GCACCATCAAGTGCAGTAATCTTTGCACTGAGATTGTCGAGTACTCCGCACCGGATGAGA 4747
Query 105042 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA 105101
||||| || ||| | || || || || || || || || ||| || | |||
Sbjct 4746 TTGCTGTTTGCAACTTGGCTTCCATTGCGCTGAACATGTTCGTCACTCCCGATAAGAAG- 4688
Query 105102 CATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAG 105161
| |||| | || | | |||| || || | ||| ||| ||| | |||| |
Sbjct 4687 --TACGATTTCCAGAAGTTGAAGCAAGTCACAAAGATTGTGACCCGCAACTTGAACAAAA 4630
Query 105162 TTATTGATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGT 105220
| ||||| ||||| ||||| | ||| || ||||| || | |||||||
Sbjct 4629 TAATTGACGTCAATTTCTACCCAATGCCAGAG-GCGAAGAAATCAAACACACGACACCGC 4571
Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT 105280
||||| || |||||||||| || |||| || | | ||||||| ||| | |||
Sbjct 4570 CCAATCGGAATCGGTGTTCAAGGATTCGCCGACGCACTCATTCTGATGCGCTATCCATAC 4511
Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340
|| ||| || || | |||| | || || || ||||| || | | ||
Sbjct 4510 GAGAGCGAACAATCGCAACTTCTCAACCAACAAATCTTCGAAACCATCTACTATGGAGCA 4451
Query 105341 CTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400
|| ||||| || | || |||| ||| ||| ||||| ||||||| |||||||| |
Sbjct 4450 CTAGAGGCAAGCTGTGAACTGGCCGAGAAGCTTGGACCATACGAAACCTATGAGGGTTGT 4391
Query 105401 CCAGCTTCACAAGGGG-TGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCAC 105457
|| | || ||||| | ||||| | || |||||| | || ||||| || ||
Sbjct 4390 CCCG-TTAGTAAGGGAATACTTCAGTACGACATGTGGAACAAGGA-ACCAA-CTGATCTG 4334
Query 105458 TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517
| || |||| ||||| ||||| || || | ||| || | ||| |||||
Sbjct 4333 TGGGATTGGGCTGCTCTGAAGGAGAAAATTGCTAAGCACGGTGTTAGGAACTCGCTCCTG 4274
Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577
|| ||||||||||| ||||| || || || |||||| | || || || |||| |||||
Sbjct 4273 ATTGCTCCAATGCCGACAGCTTCTACAGCGCAAATCCTTGGCAACAACGAATCGTTTGAG 4214
Query 105578 CCCTACACGACGAACATCTA 105597
|| ||||| ||||||||||
Sbjct 4213 CCGTACACATCGAACATCTA 4194
>seq25219
Length=1370
Score = 89.7 bits (98), Expect = 6e-13
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 94797 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856
||| | ||| || || | |||||||| ||||| || || |||||| || |||
Sbjct 232 CTTCGGTGAACGTATCATTGCATTTGCTGCAGTTGAAGGGATTTTCTTCAGCGGCAGCTT 291
Query 94857 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916
| | || | ||||| |||||||| ||||||||||| ||||| |||||||||||
Sbjct 292 CGCATCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGTCTTACATTCTCCAACGA 351
Query 94917 GCTTATCTCTCGTGACGAGGGACTCCA 94943
||| || || || ||||||||||||||
Sbjct 352 GCTGATTTCACGCGACGAGGGACTCCA 378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582194920051040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |