Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq79726 140 4e-28 seq25219 89.7 6e-13 >seq79726 Length=8148 Score = 140 bits (154), Expect = 4e-28 Identities = 628/980 (64%), Gaps = 15/980 (2%) Strand=Plus/Minus Query 104624 GAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAG 104683 ||||| ||||| |||| ||| | |||||| | || ||| ||| || | ||| Sbjct 5164 GAGCCCTGGCATTCGGACATCTTTGAGTTCTTGGATTTGAAGAAGAACACCGGAAAGGAG 5105 Query 104684 GAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAG 104742 ||| | | || |||||| | |||| ||||| |||||||| ||||| ||||||||| | Sbjct 5104 GAGAA-CAGAGCTCGCGATTTGTTCTATGCTCTATGGATTCCCGATCTGTTCATGAAGCG 5046 Query 104743 AGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA 104802 ||| || | ||| | |||||| | | || ||| | ||| || ||| | || Sbjct 5045 AGTGGAAGCCGACGGCGACTGGTCTTTGATGTGCCCACATAAGTGCCCCGGTTTGCATGA 4986 Query 104803 TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGAC 104862 | | ||| ||| |||| || | || ||||| |||||| | || || ||| | Sbjct 4985 AGTCTGGGGGGAGAAGTTCGAGGAGCTGTACACCCGTTACGAGAAGGAGGGAAAGGCAAA 4926 Query 104863 TGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921 || ||| ||| | | | | ||| || ||| | | |||||| ||||| | Sbjct 4925 CAGAACTGTGAAAGCA-CAAACGCTTTGGTTTGCCATTATAGAATCTCAAGTGGAGACCG 4867 Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981 | || || |||||||| |||||||| || || |||| ||| |||||| |||| | | Sbjct 4866 GAACTCCGTACATGCTCTACAAAGATGCTTGCAACCGCAAGTCCAATCAACAGAACATCG 4807 Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 105041 | |||||| | ||||| || || || || | || | | | ||||||| Sbjct 4806 GCACCATCAAGTGCAGTAATCTTTGCACTGAGATTGTCGAGTACTCCGCACCGGATGAGA 4747 Query 105042 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA 105101 ||||| || ||| | || || || || || || || || ||| || | ||| Sbjct 4746 TTGCTGTTTGCAACTTGGCTTCCATTGCGCTGAACATGTTCGTCACTCCCGATAAGAAG- 4688 Query 105102 CATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAG 105161 | |||| | || | | |||| || || | ||| ||| ||| | |||| | Sbjct 4687 --TACGATTTCCAGAAGTTGAAGCAAGTCACAAAGATTGTGACCCGCAACTTGAACAAAA 4630 Query 105162 TTATTGATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGT 105220 | ||||| ||||| ||||| | ||| || ||||| || | ||||||| Sbjct 4629 TAATTGACGTCAATTTCTACCCAATGCCAGAG-GCGAAGAAATCAAACACACGACACCGC 4571 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT 105280 ||||| || |||||||||| || |||| || | | ||||||| ||| | ||| Sbjct 4570 CCAATCGGAATCGGTGTTCAAGGATTCGCCGACGCACTCATTCTGATGCGCTATCCATAC 4511 Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340 || ||| || || | |||| | || || || ||||| || | | || Sbjct 4510 GAGAGCGAACAATCGCAACTTCTCAACCAACAAATCTTCGAAACCATCTACTATGGAGCA 4451 Query 105341 CTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 || ||||| || | || |||| ||| ||| ||||| ||||||| |||||||| | Sbjct 4450 CTAGAGGCAAGCTGTGAACTGGCCGAGAAGCTTGGACCATACGAAACCTATGAGGGTTGT 4391 Query 105401 CCAGCTTCACAAGGGG-TGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCAC 105457 || | || ||||| | ||||| | || |||||| | || ||||| || || Sbjct 4390 CCCG-TTAGTAAGGGAATACTTCAGTACGACATGTGGAACAAGGA-ACCAA-CTGATCTG 4334 Query 105458 TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517 | || |||| ||||| ||||| || || | ||| || | ||| ||||| Sbjct 4333 TGGGATTGGGCTGCTCTGAAGGAGAAAATTGCTAAGCACGGTGTTAGGAACTCGCTCCTG 4274 Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577 || ||||||||||| ||||| || || || |||||| | || || || |||| ||||| Sbjct 4273 ATTGCTCCAATGCCGACAGCTTCTACAGCGCAAATCCTTGGCAACAACGAATCGTTTGAG 4214 Query 105578 CCCTACACGACGAACATCTA 105597 || ||||| |||||||||| Sbjct 4213 CCGTACACATCGAACATCTA 4194 >seq25219 Length=1370 Score = 89.7 bits (98), Expect = 6e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 94797 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856 ||| | ||| || || | |||||||| ||||| || || |||||| || ||| Sbjct 232 CTTCGGTGAACGTATCATTGCATTTGCTGCAGTTGAAGGGATTTTCTTCAGCGGCAGCTT 291 Query 94857 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 | | || | ||||| |||||||| ||||||||||| ||||| ||||||||||| Sbjct 292 CGCATCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGTCTTACATTCTCCAACGA 351 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCA 94943 ||| || || || |||||||||||||| Sbjct 352 GCTGATTTCACGCGACGAGGGACTCCA 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582194920051040