Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq336 277 5e-69 seq119161 107 6e-18 seq59601 102 2e-16 seq117123 98.7 3e-15 seq145784 93.3 1e-13 seq123360 84.2 7e-11 seq52615 84.2 7e-11 >seq336 Length=4635 Score = 277 bits (306), Expect = 5e-69 Identities = 591/876 (67%), Gaps = 19/876 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || ||||| ||||||||||| || ||||| | || | ||| ||| Sbjct 1357 GCTGTTGGTATTGATTTGGGTACTACTTACTCGTGTGTAGGAGTATTCCAACATGGCAAA 1298 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| ||||| || |||||||| || | || || ||||| || || || || || Sbjct 1297 GTTGAAATCATTGCCAACGATCAAGGAAATCGTACCACACCATCTTATGTCGCCTTCACA 1238 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | ||||||||| | || || ||||| | |||| ||||||| || Sbjct 1237 GATACCGAGCGTCTTATTGGTGATGCCGCTAAGAATCAGGTTGCTATGAATCCAACCAAC 1178 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAA 349435 || | |||||||| || || | |||||| | | || || | | || || Sbjct 1177 ACTATCTTTGATGCCAAACGTTTGATTGGTCGCAAATTC---GAGGATGCCCCAGTGCAG 1121 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 || || | || || | || ||| || ||| || || ||||||| ||| Sbjct 1120 TCAGACATGAAGCACTGGCCCTTTGAAGTAGTTAGTGTTGAAGGA---AAACCAAAAATT 1064 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAA-ATTTCATCAATGGT 349554 | || ||||| | ||| ||||| | ||| | |||| || | || || || ||||| Sbjct 1063 CAAGTAATCTATAAGGATGAG-AAAAAGACTTTCTTCCCGGAGGAGATCTCTTCCATGGT 1005 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | |||||||||||| | || ||||| || | || | || || | ||||||| Sbjct 1004 CCTCACTAAAATGAAGGAGACCGCAGAAGCTTACCTCGGCAAGACTGTTTCGAATGCTGT 945 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || ||||| ||||| ||||| |||||| | |||||| || || || ||||| || | Sbjct 944 CATCACTGTTCCAGCTTATTTCAATGATTCTCAGCGTCAAGCTACCAAGGATGCCGGTAC 885 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||||| || || ||||| | | || ||||| || ||||| || || || ||||| || Sbjct 884 TATTGCTGGATTGAATGTATTGCGTATTATTAACGAGCCCACAGCAGCCGCTATTGCTTA 825 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || | || || | | || ||| || |||| ||||| ||||| || || || Sbjct 824 CGGTTTGGACAAGAAGGCTGTGGGTGAACGCAACGTTCTCATTTTCGATTTGGGCGGCGG 765 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| |||||||| || | || || |||| || |||||||| ||||| || | ||||| Sbjct 764 TACCTTTGATGTGTCTATTCTGTCAATTGATGATGGAATTTTCGAAGTCAAGTCTACTGC 705 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||||||||| || | || || |||||||| ||||| ||||| ||| | || || || | Sbjct 704 TGGTGATACTCACTTGGGCGGTGAAGATTTCGATAACCGTCTAGTTACCCACTTCGTGCA 645 Query 349915 AGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATC--CTA--GAGCAATGCGTC 349970 || || ||||| || |||| ||| | || | | | | | || |||||| Sbjct 644 GGAGTTCAAGCGCAAACACAAAAAGGATCT----GACCACCAACAAGCGTGCTCTGCGTC 589 Query 349971 GCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTA 350030 | | | ||||| |||||| | || |||||| | ||||||| |||| ||| || | Sbjct 588 GTTTGCGTACTGCCTGTGAAAGAGCAAAGCGTACGCTATCATCATCTACGCAAGCCAGCA 529 Query 350031 TTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCT 350066 | ||||||||||| ||| || || | ||||||| Sbjct 528 TAGAAATTGATTCACTTTTCGAAGGAACCGATTTCT 493 Score = 102 bits (112), Expect = 2e-16 Identities = 185/269 (69%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 183525 GAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACAT 183584 ||||||||||| || | ||| ||||||||||||| || | || |||| |||||| Sbjct 516 GAATCAATTTCTATGCTGGCTTGCGTAGATGATGATAGCGTACGCTTTGCTCTTTCACAG 575 Query 183585 GCTGTTCTTAGTCGACGTAATGATC--TTGGATTATCTGTAATATCTTGTTTATGTTTTC 183642 || || | | ||||| | | | ||| || || | ||| | ||| ||||| | Sbjct 576 GCAGTACGCAAACGACGCAGAGCACGCTTG--TTGGTGGTCAGATCCTTTTTGTGTTTGC 633 Query 183643 TTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAAT 183702 || || || | || || || || | |||| ||||||||||| || || | Sbjct 634 GCTTGAACTCCTGCACGAAGTGGGTAACTAGACGGTTATCGAAATCTTCACCGCCCAAGT 693 Query 183703 GTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATA 183762 | ||||| |||||||||| || ||||| || ||||| || ||||| | ||| || | Sbjct 694 GAGTATCACCAGCAGTAGACTTGACTTCGAAAATTCCATCATCAATTGACAGAATAGACA 753 Query 183763 CATCAAATGTACCACCACCCAAATCAAAA 183791 ||||||| ||||| || |||||||| ||| Sbjct 754 CATCAAAGGTACCGCCGCCCAAATCGAAA 782 >seq119161 Length=1594 Score = 107 bits (118), Expect = 6e-18 Identities = 259/390 (66%), Gaps = 4/390 (1%) Strand=Plus/Minus Query 350282 GATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGT 350341 |||||||||||||| |||||||||||||| || || | ||||| || | | ||| Sbjct 1383 GATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCCATTTTGCACGGTGACA--AGT 1326 Query 350342 TCTA--AAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAA 350399 | | || | | ||||| || || || ||||| |||||| | || | || | |||| Sbjct 1325 CCCAGGAAGTCCAGGATCTTTTGCTTCTTGATGTCACTCCATTGTCTTTGGGTATTGAAA 1266 Query 350400 CTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGT 350459 || | || | || |||| ||| | || | |||| || | || ||||| | Sbjct 1265 CTGCCGGCGGTGTGATGAGCGTTTTGATCAAACGTAATACCACCATTCCAACAAAGCAAA 1206 Query 350460 CCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAG 350519 ||||||| || | || | | |||| || || || | || || ||||| | || | Sbjct 1205 CCCAAACATTCACCACCTATTCAGACAACCAACCTGGTGTGTTGATCCAAGTCTACGAGG 1146 Query 350520 GTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTC 350579 |||||||||| ||||| || || || | || |||| || || ||||| Sbjct 1145 GTGAACGTGCGATGACTAAGGACAACAACTTGTTGGGCAAATTCGAACTCTCTGGAATTC 1086 Query 350580 CACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTA 350639 | ||| ||| | || || ||||| ||||| || |||| ||||||||| | || |||| Sbjct 1085 CTCCAGCTCCTCGCGGTGTCCCTCAAATTGAGGTTACTTTTGATATTGATGCCAACGGTA 1026 Query 350640 TTTTAAATGTTACCGCAGTTGAAAAATCAA 350669 |||| ||||| || || | |||| |||| Sbjct 1025 TTTTGAATGTAACTGCTCTAGAAAGGTCAA 996 >seq59601 Length=2262 Score = 102 bits (112), Expect = 2e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 140604 AAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACA 140663 || || | ||| || ||||| ||||||||||||||||| ||||| || || ||||| ||| Sbjct 2260 AAAATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTAACA 2201 Query 140664 TTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTT 140723 || || || | ||| || || || || ||||| || | ||||| || || || || || Sbjct 2200 TTTTCGATGGTATCGGAGGGCTCCACCTCAAGGGTGATAGTCTTGCCCGTAAGGGTCTTA 2141 Query 140724 ACAAAAATCTGCAT 140737 || ||||||||||| Sbjct 2140 ACGAAAATCTGCAT 2127 >seq117123 Length=8748 Score = 98.7 bits (108), Expect = 3e-15 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 67894 AGTGAAATTAAAGTTGCACAATTTAGTGGTTATGTTTCAGAACATTCAGGCTATCATCAC 67953 || ||| | || ||||| || || ||| | ||| | ||| || | ||||||||| Sbjct 3627 AGAGAAGTAAAGGTTGCTCAGTTATCTGGATCTGTCGCCGAAATGTCTGCATATCATCAC 3686 Query 67954 GGTGAAGCTAGTTTA-AATTCATCAATTGTAGGTTTAGCTCAGAATTTTGTTGGATCAAA 68012 || |||| | || || | | | ||||| | |||| ||||||||||| |||||||| Sbjct 3687 GGAGAAGTATCTCTACAAATGA-CTATTGTCAATATAGCACAGAATTTTGTGGGATCAAA 3745 Query 68013 TAATATTAATTTACTAGAACCAAAAGGTCAATTTGGAACTAGATTACTTGGAGGAAAAGA 68072 ||| |||||| | || |||||| ||||| ||||| || |||||| |||||||||||| Sbjct 3746 TAACATTAATCTTCTGGAACCACGTGGTCAGTTTGGTACAAGATTAACTGGAGGAAAAGA 3805 Query 68073 T 68073 | Sbjct 3806 T 3806 >seq145784 Length=1430 Score = 93.3 bits (102), Expect = 1e-13 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 349560 TTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTA 349619 ||||||||||||| | |||||||| || ||| | || || | |||| ||| ||| Sbjct 128 TTAAAATGAAGGAGACCGCTGAAGCTTACTTAAATACCACTGTGAAAAATGCAGTTGTTA 187 Query 349620 CTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTG 349679 | |||||||| || || || ||| |||| ||| || || ||||||||||| ||| Sbjct 188 CAGTACCAGCTTACTTCAACGATTCCCAACGTCAAGCTACCAAAGATGCTGGTCAAATTT 247 Query 349680 CGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGC 349739 |||| || || ||| | | | ||||| |||||||| || || || | || ||||| Sbjct 248 CGGGATTGAACGTTTTGCGTGTTATTAACGAACCCACAGCAGCTGCCTTGGCCTATGGTA 307 Query 349740 TTGATAAAA 349748 | || |||| Sbjct 308 TGGACAAAA 316 >seq123360 Length=1680 Score = 84.2 bits (92), Expect = 7e-11 Identities = 88/115 (77%), Gaps = 3/115 (3%) Strand=Plus/Plus Query 183679 TATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATT- 183737 ||||||| |||||||| || || |||||||| |||||||| | ||| ||||| || | Sbjct 847 TATCAAAGTCTTCACCGCCCAAGTGTGTATCACCAGCAGTTGATTTGACTTCGAAGAGGG 906 Query 183738 --CCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || || || ||| |||||| || ||||||||||| || ||||| | ||| || Sbjct 907 AGCCTTCGTCGATAGCTAAAATGGACACATCAAATGTTCCGCCACCTAGATCGAA 961 >seq52615 Length=2943 Score = 84.2 bits (92), Expect = 7e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 183680 ATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCC 183739 ||| ||||||||||| || ||||||||||||||| || || |||||||| | ||| Sbjct 2650 ATCGAAATCTTCACCGCCCAAATGTGTATCGCCATTGGTTGCAACGACTTCAAACACTCC 2709 Query 183740 GTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || ||||| | |||| ||| || || || || ||||| |||||||| || Sbjct 2710 GTTATCAATTGTCAAAAGTGACACGTCGAAGGTGCCACCGCCCAAATCGAA 2760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1512416122055388