Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq79726 125 8e-24
seq25219 104 3e-17
>seq79726
Length=8148
Score = 125 bits (138), Expect = 8e-24
Identities = 352/537 (66%), Gaps = 4/537 (1%)
Strand=Plus/Plus
Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116
|| |||| |||||| || || |||| ||||| || ||||| || || |||||
Sbjct 4725 GAAGCCAAGTTGCAAACAGCAATCTCATCCGGTGCGGAGTACTCGACAATCTCAGTGCAA 4784
Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176
| |||| ||||||||||||||||||||| || ||| ||| ||| || || ||
Sbjct 4785 AGATTACTGCACTTGATGGTGCCGATGTTCTGTTGATTGGACTTGCGGTTGCAAGCATCT 4844
Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATG 79236
|||||| ||||||||| || |||||||| || ||| | | || | | ||| |
Sbjct 4845 TTGTAGAGCATGTACGGAGTTCCGGTCTCCACTTGAGATTCTATAATGGCAAACCAAAGC 4904
Query 79237 TCCCGGGCCCGGACAACCTTCT-TGTACCGA-CCCTGTGCGACGTACGTCCGGTACAACT 79294
| || ||| |||| | | || |||| |||| ||||| ||
Sbjct 4905 GTTTGTGCTTTCACAG--TTCTGTTTGCCTTTCCCTCCTTCTCGTAACGGGTGTACAGCT 4962
Query 79295 CGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGT 79354
| | ||| |||||| |||| || ||| || ||||||| || ||||||||||
Sbjct 4963 CCTCGAACTTCTCCCCCCAGACTTCATGCAAACCGGGGCACTTATGTGGGCACATCAAAG 5022
Query 79355 GCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGA 79414
|||||| |||| || || || |||||| || || || ||||| || || ||
Sbjct 5023 ACCAGTCGCCGTCGGCTTCCACTCGCTTCATGAACAGATCGGGAATCCATAGAGCATAGA 5082
Query 79415 AGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCA 79474
| | ||||| | ||||||| | || |||| || || | || || |
Sbjct 5083 ACAAATCGCGAGCTCTGTTCTCCTCCTTTCCGGTGTTCTTCTTCAAATCCAAGAACTCAA 5142
Query 79475 TGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGC 79534
|||||| | ||||| ||||||| || |||||||| | ||| ||||||||||| |
Sbjct 5143 AGATGTCCGAATGCCAGGGCTCCAAGTAAATGGCGAAGGCACCTGGTCGCTTGCCGCCTC 5202
Query 79535 CCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGT 79591
| |||| ||| ||||| || ||||||||| ||| ||||| || || | |||||
Sbjct 5203 CTTGGTCGACATACCGAGCGACGTTGTTGAACCCTCTCAGCATTGGAACAAGGCCGT 5259
>seq25219
Length=1370
Score = 104 bits (114), Expect = 3e-17
Identities = 109/141 (77%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 59980 AACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCT 60038
||||| |||| || ||||| ||| || ||||| || |||||| ||| ||| |
Sbjct 240 AACGTATCATTGCATTTGC-TGCAGTTGAAGGGATTTTCTTCAGCGGCAGCTTCGCATCA 298
Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098
|| |||||||| || ||||| || |||||||| || || | ||||||||||||||||||
Sbjct 299 ATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGTCTTACATTCTCCAACGAGCTGATT 358
Query 60099 TCCCGGGACGAGGGCCTCCAT 60119
|| || |||||||| ||||||
Sbjct 359 TCACGCGACGAGGGACTCCAT 379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547522398354240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |