Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_028448.1
Length=167467
Score E
Sequences producing significant alignments: (Bits) Value
seq145875 114 1e-20
seq123113 84.2 2e-11
>seq145875
Length=1531
Score = 114 bits (126), Expect = 1e-20
Identities = 244/355 (69%), Gaps = 12/355 (3%)
Strand=Plus/Minus
Query 79775 aCAATCTCATCAAACACCTTCGATGGATCAGTATAAAGATTTCGCATGATATGTGTATAT 79834
||||| |||||||| || ||||||||||| | | || || || ||||| |||||
Sbjct 1397 ACAATATCATCAAAGACAATCGATGGATCATTGACGATGTTACGAATAATATGGGTATAA 1338
Query 79835 GAACGGCTGTGAATAGTTTCACTAAAAGTCCACGTAGCAACCCATGTATCAAGGCTTGGG 79894
|| || ||| |||||||| ||| | |||||| ||||||| || |||| ||| ||
Sbjct 1337 GATCGCGAGTGGATAGTTTCTGAAAATGACCACGTTTCAACCCAAGTTTCAA-GCTCAGG 1279
Query 79895 T-CTGAAATTAATGACATAAGTACAGCAGATGGCGCGCGACCCTGAATGCTATCCA--AA 79951
| ||||||||| | | | | | || || ||| || ||||| ||||| ||
Sbjct 1278 TATTGAAATTAAAGGGAGCAATGCGACATTCGGACTGCGTCCTTGAATCGAATCCAGTAA 1219
Query 79952 AGTGATTGATACTTCAGGTTATTAGTAAAAATATTCTGTTGATACTGAGGAAGTTTATTA 80011
||| |||||| || | |||| | ||||||||| | || || | ||||||| | |
Sbjct 1218 AGT--TTGATATTTTAAGTTACTGATAAAAATATGTTTTTCATGTTCAGGAAGTCCAGCA 1161
Query 80012 -AATTGTGCAGCATCCATCATCAAGTTT--ACTTCTTCAGGACGCCAGAAAAATGATAAT 80068
||| | | ||| | | || | | |||||||| || ||||| ||||| |||||
Sbjct 1160 TAATCGATTCG-ATC--TTGTGAAATATCCACTTCTTCTGGCCGCCAAAAAAAAGATAAC 1104
Query 80069 TGCTTTTCAGTCAAATCTTCAAAAACTTTATGGCGTTGAATATCATAACGCGCAA 80123
||||||||| | | | |||||||| || || ||| ||||||||||||||
Sbjct 1103 TGCTTTTCAATTAGTTTTTCAAAAATTTCATATTTTTGTTGATCATAACGCGCAA 1049
>seq123113
Length=2487
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/194 (70%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 152166 CCGCCATATTGATGGGAAGCAACCTGTGCAGTAATTTGTGCCATAATTG--CAGTAGCAA 152223
|| |||||||| |||||||| | ||| ||||||||| | | ||| |||| |||
Sbjct 2303 CCACCATATTGTAATGAAGCAACATTAGCAATAATTTGTG--AAACTTGAGCAGTTGCAG 2246
Query 152224 CGCCAATTGATTTAGGAGTTTCAATCTGTGCATTACCAAGCTTAAATCCGTTCTCAAGCA 152283
||| || |||| || || | |||||||||| ||||| || || | ||
Sbjct 2245 TTTGAATGGAACGGGGAGATTTAACTTCAGCATTACCAATTTTAAAACCATTAGTGAACA 2186
Query 152284 TTCCTTTTAAATCTACTAAACAGCAATTAGTAAATGGAAGAGCAGGGGAATAATCAATAT 152343
|| |||| ||||| ||||||||||||| || |||| ||| ||| |||| || | ||
Sbjct 2185 TTTCTTTAAAATCAACTAAACAGCAATACGTTTCTGGAGTAGCGGGGTAATAGTCCAAAT 2126
Query 152344 CATGGAAATGAATA 152357
|||| ||||||||
Sbjct 2125 CATGCCAATGAATA 2112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 534787313692320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |