Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_028672.1 Length=149732 Score E Sequences producing significant alignments: (Bits) Value seq145875 91.5 1e-13 >seq145875 Length=1531 Score = 91.5 bits (100), Expect = 1e-13 Identities = 235/355 (66%), Gaps = 10/355 (3%) Strand=Plus/Minus Query 24286 ATGTCGTCAAAGACGATCGACGGATCTGCCAGGATGTTACGGATGATATGGGTGTATGAG 24345 || || |||||||| ||||| ||||| | ||||||||| || |||||||| || || Sbjct 1394 ATATCATCAAAGACAATCGATGGATCATTGACGATGTTACGAATAATATGGGTATAAGAT 1335 Query 24346 CGAGAGTGGATAGTCTCACTGAACGCCCAAGTCTCTACCCATGTTTCCAG----GGTTGT 24401 || ||||||||||| || || | ||| || || ||||| ||||| || ||| | Sbjct 1334 CGCGAGTGGATAGTTTCTGAAAATGACCACGTTTCAACCCAAGTTTCAAGCTCAGGTATT 1275 Query 24402 GTCGGACACGATCGGGAGCAGAACTGCGTTCGGCCCACGGCCCTGTACAGAATCCAGAAG 24461 || | | ||||||| | | ||||| | || || || | |||||||| | Sbjct 1274 ----GAAATTAAAGGGAGCAATGCGACATTCGGACTGCGTCCTTGAATCGAATCCAGTAA 1219 Query 24462 GATCTGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCA-TGT 24520 | || || || | ||| ||||| || || || || || || || || || | || | Sbjct 1218 AGTTTGATATTTTAAGTTACTGATAAAAATATGTTTTTCATGTTCAGGAAG-TCCAGCAT 1160 Query 24521 AGTCGATACGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCT 24580 | ||||| || || | | | | |||||||| || ||||| || || | | |||| Sbjct 1159 AATCGATTCGATCTTGTGAAATATCCACTTCTTCTGGCCGCCAAAAAAAAGATAACTGCT 1100 Query 24581 TCTCGATCAGCTTCTCGAACTTGGCGTGTTTCTGCTGGTCATAGCGAGAAACGTT 24635 | || || || || || || | | | ||| || || ||||| || | ||| || Sbjct 1099 TTTCAATTAGTTTTTCAAAAATTTCATATTTTTGTTGATCATAACGCGCAACATT 1045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478139025134720