Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_028773.1
Length=182145
Score E
Sequences producing significant alignments: (Bits) Value
seq145875 122 1e-22
>seq145875
Length=1531
Score = 122 bits (134), Expect = 1e-22
Identities = 242/357 (68%), Gaps = 16/357 (4%)
Strand=Plus/Plus
Query 20065 TTGCGCGTTACGATACCCAGAAACATGAAATGTTCGAAAACTTAATTGAAAAGCAGTTGA 20124
|||||||||| ||| || ||| ||||||| || ||||| ||||||||||||||||
Sbjct 1049 TTGCGCGTTATGATCAACAAAAATATGAAATTTTTGAAAAACTAATTGAAAAGCAGTTAT 1108
Query 20125 GTTTCTTCTGGCGTCCTGAAGAGGTTGACGTAACTCGTGATAAGATCGATTATGATAATT 20184
||| || ||||| || ||||| || || | | | ||| |||||||||| |
Sbjct 1109 CTTTTTTTTGGCGGCCAGAAGAAGTGGATATTTCACAAGATCGAATCGATTATGCTGGAC 1168
Query 20185 TACCAGAACATGAAAAACATATCTTTACTTCCAATTTGAAGTATCAGAGCTTACTCGATA 20244
| || ||||||||||||||||| |||| || || || ||||| | ||||| |||
Sbjct 1169 TTCCTGAACATGAAAAACATATTTTTATCAGTAACTTAAAATATCAAACTTTACTGGATT 1228
Query 20245 CCGTTCAGGGACGTGCTCCTAA-----CACTGCT---TTTATGTCCATCGTATCTGATGT 20296
| |||| ||||| ||| || || |||| |||| | || || ||||
Sbjct 1229 CGATTCAAGGACGCAGTCCGAATGTCGCATTGCTCCCTTTAATTTCA--ATACCTGA--- 1283
Query 20297 AACACTTGACACATGGATTCCTACCTGGGCGTTCTCGGAGACAATCCACAGTCGTTCTTA 20356
||||| || ||| || || ||| | || || || || |||||| || |||||
Sbjct 1284 ---GCTTGAAACTTGGGTTGAAACGTGGTCATTTTCAGAAACTATCCACTCGCGATCTTA 1340
Query 20357 TACACACATTATGCGCAACGTGTACGAAGATCCGTCCAAGATCTTTGACGAAATCGT 20413
||| || ||||| || ||| | | | ||||| || | ||||||| || || ||
Sbjct 1341 TACCCATATTATTCGTAACATCGTCAATGATCCATCGATTGTCTTTGATGATATTGT 1397
Score = 113 bits (124), Expect = 5e-20
Identities = 542/845 (64%), Gaps = 39/845 (5%)
Strand=Plus/Plus
Query 19072 TCGGCGTTCAATCTTGGTAAAATTGAAAGTCTTCATGATTTCGAAAAAGCTGCCCGCGTT 19131
|| || || ||||||||| |||||||| |||| ||||||| ||| || || |
Sbjct 1 TCCGCATTTAATCTTGGTGAAATTGAATCTCTTGATGATTTTGAAGAATTAGCTGATTTG 60
Query 19132 GCTGTTCGAGCACTGGATAACCTGCTTGATTATCAAGAATATCCGATGGAAGCAGCATTA 19191
||||| || ||||| ||| || || ||||||||||| || || || || ||| |
Sbjct 61 GCTGTACGTGCACTTGATTCACTACTGGATTATCAAGATTACCCAATTCCTGCGGCAAGA 120
Query 19192 A-AAGGTC--TGAAACGTCGTTCATTAGGAATCGGTATTACCAACTTTGCTTATTATCTC 19248
| | || |||| ||||| |||| || |||||| | | ||| | || || |||||
Sbjct 121 ACATCATCAATGAACCGTCGAACATTGGGGATCGGTGTCATCAATTACGCATACTATCTT 180
Query 19249 GCGAAAAATTACGTGAAATATTCAGACGGTTCAGCTAATGAATTGGTTCACGAAATGATG 19308
|| || || ||| |||||||| || || |||||| | || || || |
Sbjct 181 GCTAAGCATGGCGTTAAATATTCTGATGGAAGTGCTAATAACTTAACGCATAGAACATTT 240
Query 19309 GAAGCATTCCAGTATTATCTGCTTAAAGCTTCGATGGAATTAGCAAAAGAGCGTGGTGCT 19368
|||||| | || |||||| |||| |||||||| | | | || |||||| || ||
Sbjct 241 GAAGCAATGCAATATTATTTGCTCAAAGCTTCAAACAACCTTGCTAAAGAGAAAGGGGCA 300
Query 19369 TGTGAATATTTCCACAAAACGTCATATTCTCGCGGCGTTCTACCGATTGATCGATACAAG 19428
||| | || | |||| | || || | || || | |||||||| || |||
Sbjct 301 TGTCCTTTATTTAATGAAACAACCTACTCACAAGGTATTTTGCCGATTGACACTTATAAG 360
Query 19429 AAAACTGTTGACAATCT---TGTTGATCCAGTGTATCGTATGGACTGGGAAGCGCTTCGT 19485
|| | ||| | | | || ||| | || ||| || ||||| || | ||
Sbjct 361 AAGGAGTTAGACGCTTTAACTAAAGAGCCACTCCAT--TAT-GAATGGGATGCTTTGCGA 417
Query 19486 GCCGACATCATGAAATATGGTCTTCGTAACTCTACGTTGTCAGCGCTGATGCCTTGTGAA 19545
| || | ||||| ||| | ||||||||||| || || ||||| ||||| | |||
Sbjct 418 GAATCAATTAAAAAATACGGTTTACGTAACTCTACTTTATCTGCGCTCATGCCGTCGGAA 477
Query 19546 TCAAGTTCACAGATCACCAACTCCACGAACGGTATCGAGCCGCCTCGTCAGTTGCTG--A 19603
| |||||| || | || | || || || ||||| |||||||| || | || |
Sbjct 478 ACGTCTTCACAAATTTCTAATGCGACTAATGGAATCGAACCGCCTCG--AGGTTATGTCA 535
Query 19604 GTGTAAAACAGTCTAAAGACGGTGTACTGAATCAGCTTGTTCCTGAAGTTGAAATTTTAG 19663
| |||||| || ||||| || | | ||| |||||||||| || | | ||
Sbjct 536 GCGTAAAAGCATCGAAAGATGGCATTTTACGTCAAGTTGTTCCTGA--TT--ATCATGAG 591
Query 19664 CTT----CTGAGTATGAACTAGCATGGCAAATGGCAGATAAAGGTATGAAAGGTTATCTG 19719
||| | || ||| || ||||||||| | ||| || | || || ||
Sbjct 592 CTTAAAAATTTCTACGAATTATTATGGCAAATTCC---TAA---TAATCACGGGTACTTG 645
Query 19720 TCTCTGGTTGCTATCATGCAAAAATTCTGTGATCAGTCAATCAGTGCAAACACTTATTCC 19779
|| |||| ||||||||| ||||| |||||| || || || || ||| ||| |
Sbjct 646 CAACTTGTTGGTATCATGCAGAAATTTATTGATCAATCGATTTCAGCCAATACTAATTAC 705
Query 19780 AACCC--GTACATTTATCCTGGTGATAAAGTTCCGATGGA--AGTTATGCTTGCTGATTT 19835
| || | ||||| | ||||||||| || ||| | ||||| ||||| || ||
Sbjct 706 GATCCAACAAAATTTA--CCAATGATAAAGTACCTATGAAACAGTTA--CTTGCAGACTT 761
Query 19836 GATCTTTATGCAAGTTCAT--GGTATTAAAACCATTTACTATCATAACACCCGAGACGGT 19893
||| || | || || || ||||| |||| |||||||| || ||||| |||
Sbjct 762 --ACTTACAGCTTATAAATACGGCATAAAAACGCTTTATTATCATAATACTCGAGATGGT 819
Query 19894 GCAGA 19898
|||||
Sbjct 820 GCAGA 824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 581671079096800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |