Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq145875 123 3e-23 >seq145875 Length=1531 Score = 123 bits (136), Expect = 3e-23 Identities = 299/444 (67%), Gaps = 14/444 (3%) Strand=Plus/Plus Query 24546 AAAGAACCTATGTTTTTTGGTTCAGGTCTTGGTATTGCGCGTTATGATATTCAACGCCAT 24605 |||||||| |||||| |||| | || | |||||||||||||| ||| || Sbjct 1015 AAAGAACCGATGTTTCTTGGACAATCGGTTAATGTTGCGCGTTATGATCAACAAAAATAT 1074 Query 24606 AAAGTTTTTGAAGATTTAACCGAAAAGCAATTATCATTTTTCTGGCGTCCTGAAGAAGT- 24664 || |||||||| | ||| |||||||| ||||| ||||| ||||| || |||||||| Sbjct 1075 GAAATTTTTGAAAAACTAATTGAAAAGCAGTTATCTTTTTTTTGGCGGCCAGAAGAAGTG 1134 Query 24665 -AAACTTGATGATGGATGCTGCACAGTTTAATAAG--CTTCCTCAGTATCAGCAAAATAT 24721 | | || | | ||| | | | ||| | |||||| | || | || |||| Sbjct 1135 GATATTTCACAA--GATC--GAATCGATTATGCTGGACTTCCTGAACATGAAAAACATAT 1190 Query 24722 TTTTACTAATAATCTGAAGTATCAATCACTTT--TGGATAGCATTCAGGGTCGTGCGCCG 24779 ||||| | ||| | || |||||| ||||| ||||| ||||| || || ||| Sbjct 1191 TTTTATCAGTAACTTAAAATATCAA--ACTTTACTGGATTCGATTCAAGGACGCAGTCCG 1248 Query 24780 TCTGCTGTACTTATGTCATTAATTTCAG-ACCCAAGCCTTGATACATGGGTTGCTACGTG 24838 || | | | | | ||||||||| ||| ||| |||| || ||||||| ||||| Sbjct 1249 AATGTCGCATTGCTCCCTTTAATTTCAATACCTGAGC-TTGAAACTTGGGTTGAAACGTG 1307 Query 24839 GACTTTTAGTGAAACTATTCACTCTCGTTCATATACACATATCATGCGAAATCTTTATAC 24898 | | ||| |||||||| ||||| || || ||||| ||||| || || || | | Sbjct 1308 GTCATTTTCAGAAACTATCCACTCGCGATCTTATACCCATATTATTCGTAACATCGTCAA 1367 Query 24899 TGATCCATCGAAGGTATTTGATGAGATTGTATTAGATGAAGCTATTATGAAACGTGCTGA 24958 ||||||||||| || |||||||| ||||| | || | ||| |||||||| | Sbjct 1368 TGATCCATCGATTGTCTTTGATGATATTGTGACAAATACCGAAATTCAAAAACGTGCAGG 1427 Query 24959 ATCCATTGGACGTTATTATGATGA 24982 | ||| | | ||||||||||| Sbjct 1428 AGACATCGCTGGCTATTATGATGA 1451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533691719501440