Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_028829.1
Length=248088
Score E
Sequences producing significant alignments: (Bits) Value
seq146010 87.8 3e-12
>seq146010
Length=1781
Score = 87.8 bits (96), Expect = 3e-12
Identities = 496/783 (63%), Gaps = 21/783 (3%)
Strand=Plus/Plus
Query 126014 TTTGTCATAGTTCAAAATGTCTGGGTACATACGCTTACTTGCACATTCAAGAGCTAACTT 126073
||| || || || ||||| || |||||||||||||||||||||||||| | || | ||
Sbjct 561 TTTATCGTAATTTAAAATATCGGGGTACATACGCTTACTTGCACATTCTAATGCGAGTTT 620
Query 126074 TTTGATGCCGTAGCACGGGTCGCCTTCTTTCAGATTCACGCCGTCTCTCAATGTGAAAAC 126133
|||||| | || || || | || |||| ||||| ||| | | || || ||
Sbjct 621 TTTGATATCATAATTGATATCACCAACCTTATGATTAACGCCATCTTTTATTGCAAACAC 680
Query 126134 AAGCTTAGGGAAAATAGCAGTTTTCTTAGTCTTACCTAGACCTGCAATACG-ATTCTGAA 126192
| || || |||| || ||||| | |||| |||| ||| | ||| ||| | ||
Sbjct 681 CAATTTTGGAAAAACTGCTGTTTTGTGGTTCTTTCCTAATCCTTTTAAACGTATTTTTAA 740
Query 126193 GAATACTTTTTTGAATAAGTTTTTCTTCCCACGACGTACCTAACCCGAAGTTGATTGTCG 126252
|||| || ||| || ||| | |||||| ||||||| || ||| | |||
Sbjct 741 -AATAGATTCTTGGATGAGTCGTGATTCCCAACTTTTACCTAATCCAAAGCCAAATGTAA 799
Query 126253 TGAATGGTGTCTGACCGTTTGAAGTCTGCATCGTATTGACTTGATATTCAAACGTCTGGA 126312
||||| || ||||| || | || || | || || |||| || |||| | ||||
Sbjct 800 CAAATGGCGTTTGACCATTAGCGGTGTGGAGTGTGTTCACTTCGTACTCAAGAGATTGGA 859
Query 126313 ATGCATCGAACGTTTCCTTTTCAACACGCTTTCGTGCAAAGATAGCAGCTTTAGAATCAG 126372
||||||| | || |||||| || ||| |||| || ||| || |
Sbjct 860 ATGCATCATAACACTCTTTTTCAGTGCGATTTTTTGCATAGTGGTCAGGATT----TTTT 915
Query 126373 AGTCGGGATGTTCT-TCTCGACCTACTTCGAGCCATTTATAATATGACTTACGAACATAA 126431
| | | | ||| || |||| | ||| | || |||| ||| ||| |||| |
Sbjct 916 ATTTGCCA--CTCTGTCGCGACTTGCTT-ATGTTTTTGATAA-CTGA--TACTAACAAAT 969
Query 126432 GGTGCTAGGACTTCGTCGATTCTATTGATCGTGTTACCGCCGTAGATATGGCTACTTACT 126491
||||| | || ||||| | ||| || || | || ||||| |||||||| ||
Sbjct 970 TTTGCTAATATCTCATCGATACGATTAATTGTCGTTCCACCGTAAATATGGCTTGCCACC 1029
Query 126492 TGCTGAATAATCTGAGTTACAACAGTGGCAGCAGTGCTAATACTGTTTGGTTCTTCGATT 126551
|| |||||| |||| || | || || || |||| || || ||| |||
Sbjct 1030 TGAGCAATAATTTGAGCCGTGACCGCGGTTGCCGTTGCAATAGATTTAGGCGGTTCAATT 1089
Query 126552 TCAGCATTACCCATTTTGAAGCCGCCTTCAAACATGCCTTTGATATCAATAAGCATACAG 126611
|| || || |||||||| || ||| || |||||| | | ||| || | ||| ||
Sbjct 1090 TCGGCGTTGCCCATTTTAAAACCGTTGGTAAGCATGCCATCTAGATCGATTAACATGCAA 1149
Query 126612 TTGAATTGCGGGAATAATGGACTGTAGTCAAGGTCATGAAAATGAATATCGCCGTCGATA 126671
|| || || || ||||| || || | |||||| ||||||| || || | |
Sbjct 1150 TTAAACATTGGAAAAAATGGTGCATAATCCAAATCATGATAATGAATTTCTCCACGGTCA 1209
Query 126672 TGTGCATCTGCAATATGCTTCGG---TAGATAGT-CTTCAAGTGCGTAATGTTTCGACAC 126727
|| || || ||||| || || ||||| | |||| || ||||| | ||
Sbjct 1210 TGGGCGCTTGAAATATCTTTTGGCAAAAGATACTGCTTC----GCATAATGACGGGCGAC 1265
Query 126728 TGTGCCAGCTACTAAGTCACGCATTGTAGGGATTACTTTCGAATCTTTATTTGCATTCTC 126787
| || |||| || || || ||| ||||||||||| |||||||| ||||| ||
Sbjct 1266 GATACCCGCTAATAGATCCCGTTGTGTTGGGATTACTTTACTGTCTTTATTAGCATTTTC 1325
Query 126788 TTT 126790
||
Sbjct 1326 ATT 1328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 792303054983680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |