Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_028829.1 Length=248088 Score E Sequences producing significant alignments: (Bits) Value seq146010 87.8 3e-12 >seq146010 Length=1781 Score = 87.8 bits (96), Expect = 3e-12 Identities = 496/783 (63%), Gaps = 21/783 (3%) Strand=Plus/Plus Query 126014 TTTGTCATAGTTCAAAATGTCTGGGTACATACGCTTACTTGCACATTCAAGAGCTAACTT 126073 ||| || || || ||||| || |||||||||||||||||||||||||| | || | || Sbjct 561 TTTATCGTAATTTAAAATATCGGGGTACATACGCTTACTTGCACATTCTAATGCGAGTTT 620 Query 126074 TTTGATGCCGTAGCACGGGTCGCCTTCTTTCAGATTCACGCCGTCTCTCAATGTGAAAAC 126133 |||||| | || || || | || |||| ||||| ||| | | || || || Sbjct 621 TTTGATATCATAATTGATATCACCAACCTTATGATTAACGCCATCTTTTATTGCAAACAC 680 Query 126134 AAGCTTAGGGAAAATAGCAGTTTTCTTAGTCTTACCTAGACCTGCAATACG-ATTCTGAA 126192 | || || |||| || ||||| | |||| |||| ||| | ||| ||| | || Sbjct 681 CAATTTTGGAAAAACTGCTGTTTTGTGGTTCTTTCCTAATCCTTTTAAACGTATTTTTAA 740 Query 126193 GAATACTTTTTTGAATAAGTTTTTCTTCCCACGACGTACCTAACCCGAAGTTGATTGTCG 126252 |||| || ||| || ||| | |||||| ||||||| || ||| | ||| Sbjct 741 -AATAGATTCTTGGATGAGTCGTGATTCCCAACTTTTACCTAATCCAAAGCCAAATGTAA 799 Query 126253 TGAATGGTGTCTGACCGTTTGAAGTCTGCATCGTATTGACTTGATATTCAAACGTCTGGA 126312 ||||| || ||||| || | || || | || || |||| || |||| | |||| Sbjct 800 CAAATGGCGTTTGACCATTAGCGGTGTGGAGTGTGTTCACTTCGTACTCAAGAGATTGGA 859 Query 126313 ATGCATCGAACGTTTCCTTTTCAACACGCTTTCGTGCAAAGATAGCAGCTTTAGAATCAG 126372 ||||||| | || |||||| || ||| |||| || ||| || | Sbjct 860 ATGCATCATAACACTCTTTTTCAGTGCGATTTTTTGCATAGTGGTCAGGATT----TTTT 915 Query 126373 AGTCGGGATGTTCT-TCTCGACCTACTTCGAGCCATTTATAATATGACTTACGAACATAA 126431 | | | | ||| || |||| | ||| | || |||| ||| ||| |||| | Sbjct 916 ATTTGCCA--CTCTGTCGCGACTTGCTT-ATGTTTTTGATAA-CTGA--TACTAACAAAT 969 Query 126432 GGTGCTAGGACTTCGTCGATTCTATTGATCGTGTTACCGCCGTAGATATGGCTACTTACT 126491 ||||| | || ||||| | ||| || || | || ||||| |||||||| || Sbjct 970 TTTGCTAATATCTCATCGATACGATTAATTGTCGTTCCACCGTAAATATGGCTTGCCACC 1029 Query 126492 TGCTGAATAATCTGAGTTACAACAGTGGCAGCAGTGCTAATACTGTTTGGTTCTTCGATT 126551 || |||||| |||| || | || || || |||| || || ||| ||| Sbjct 1030 TGAGCAATAATTTGAGCCGTGACCGCGGTTGCCGTTGCAATAGATTTAGGCGGTTCAATT 1089 Query 126552 TCAGCATTACCCATTTTGAAGCCGCCTTCAAACATGCCTTTGATATCAATAAGCATACAG 126611 || || || |||||||| || ||| || |||||| | | ||| || | ||| || Sbjct 1090 TCGGCGTTGCCCATTTTAAAACCGTTGGTAAGCATGCCATCTAGATCGATTAACATGCAA 1149 Query 126612 TTGAATTGCGGGAATAATGGACTGTAGTCAAGGTCATGAAAATGAATATCGCCGTCGATA 126671 || || || || ||||| || || | |||||| ||||||| || || | | Sbjct 1150 TTAAACATTGGAAAAAATGGTGCATAATCCAAATCATGATAATGAATTTCTCCACGGTCA 1209 Query 126672 TGTGCATCTGCAATATGCTTCGG---TAGATAGT-CTTCAAGTGCGTAATGTTTCGACAC 126727 || || || ||||| || || ||||| | |||| || ||||| | || Sbjct 1210 TGGGCGCTTGAAATATCTTTTGGCAAAAGATACTGCTTC----GCATAATGACGGGCGAC 1265 Query 126728 TGTGCCAGCTACTAAGTCACGCATTGTAGGGATTACTTTCGAATCTTTATTTGCATTCTC 126787 | || |||| || || || ||| ||||||||||| |||||||| ||||| || Sbjct 1266 GATACCCGCTAATAGATCCCGTTGTGTTGGGATTACTTTACTGTCTTTATTAGCATTTTC 1325 Query 126788 TTT 126790 || Sbjct 1326 ATT 1328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 792303054983680