Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_028847.1 Length=170527 Score E Sequences producing significant alignments: (Bits) Value seq145875 100 3e-16 >seq145875 Length=1531 Score = 100 bits (110), Expect = 3e-16 Identities = 269/407 (66%), Gaps = 6/407 (1%) Strand=Plus/Minus Query 142136 GTCGTCGTAATAACGACCAATAGATTCAGCACGTTTCATAATAGCGTCATCTAACAGAAT 142195 ||| || ||||| | | | || | | |||||||| ||| || || | || ||| Sbjct 1452 GTCATCATAATAGCCAGCGATGTCTCCTGCACGTTTTTGAATTTCGGTATTTGTCACAAT 1393 Query 142196 TTCATCAAATACCTTTGACGGGTCTGTATAGAGGTTACGCATGATATGGGTATATGAACG 142255 |||||||| || | || || || | || |||||| || ||||||||||| || || Sbjct 1392 ATCATCAAAGACAATCGATGGATCATTGACGATGTTACGAATAATATGGGTATAAGATCG 1333 Query 142256 AGAGTGAATAGTCTCACTAAAGGTCCATGTAGCCACCCATGTATCAAGGCTAGGGTCTGA 142315 ||||| ||||| || ||| | ||| || | ||||| || ||||| ||| ||| Sbjct 1332 CGAGTGGATAGTTTCTGAAAATGACCACGTTTCAACCCAAGTTTCAAGCTCAGGTATTGA 1273 Query 142316 AATCAAGGCTTGAAGTGCAGCAGAAGGAGCACGTCCTTGGATACTATCCAGAAGTGATTG 142375 ||| || | | | ||| || ||| |||||||| || |||||| | | ||| Sbjct 1272 AATTAAAGGGAGCAATGCGACATTCGGACTGCGTCCTTGAATCGAATCCAGTAAAGTTTG 1213 Query 142376 ATACTTCAGGTTATTGGTAAAAATATTTTGTTGGAATTGTGGAAGCTTATTA-AATTGAG 142434 ||| || | |||| || ||||||||| || || || ||||| | | ||| || Sbjct 1212 ATATTTTAAGTTACTGATAAAAATATGTTTTTCATGTTCAGGAAGTCCAGCATAATCGAT 1153 Query 142435 CAGCATCCATCATCAA--GTTGACTTCTTCTGGACGCCAGAAAAAACTCAACTGCTTTTC 142492 | ||| | | || | ||||||||||| ||||| |||||| ||||||||||| Sbjct 1152 TCG-ATC--TTGTGAAATATCCACTTCTTCTGGCCGCCAAAAAAAAGATAACTGCTTTTC 1096 Query 142493 ACAAAGCTCTTCGAATACTTTATGACGTTGGATATCATAACGGGCAA 142539 | || | ||| || | || || ||| ||||||||| |||| Sbjct 1095 AATTAGTTTTTCAAAAATTTCATATTTTTGTTGATCATAACGCGCAA 1049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544561419301920