Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_029009.1 Length=147589 Score E Sequences producing significant alignments: (Bits) Value seq123113 188 7e-43 seq146010 161 9e-35 seq77851 129 6e-25 seq21678 96.9 3e-15 >seq123113 Length=2487 Score = 188 bits (208), Expect = 7e-43 Identities = 293/418 (70%), Gaps = 3/418 (1%) Strand=Plus/Minus Query 38781 ATAACGTATTGATTTCATACTCTAGGCTTTGCATTGCATCGTAAATATCTTTGTTTGTTT 38840 |||| |||||||||||||| |||| |||| | ||||| || ||||||| || || Sbjct 2485 ATAAAGTATTGATTTCATATTCTAATGATTGCGTGGCATCATAGATATCTTGTTTAGTAC 2426 Query 38841 TCTCGATTGCATATGTTTCTGGTTCGGGAATACGGTAACGTT---TAGCATCCGCCATAT 38897 | || | || |||| |||| |||| | || | || ||||| || | | Sbjct 2425 TTTCTTTAGCGTATGATTCTTGTTCATCTTCAGGGACCCATTCTTTAGCAACCTTAAGGT 2366 Query 38898 GTTTTTGATAATTCATTTCGGCATAAGGTGCTAATACTTCATCAATGCGGTCAAATGAAC 38957 | |||||||| || ||||| ||| | || ||||| |||||||| || ||||| || Sbjct 2365 GCTTTTGATAGTTAATTTCAGCAAATGGGGCTAACACTTCATCGGCACGATCAAAAGATA 2306 Query 38958 AACCCCCATACTGACTGGAAGCCACATTCGCAATAATTTGTGCTGTTTGTGCTGTAGCTG 39017 |||| ||||| || ||||| ||||| ||||||||||||| ||| || || || | Sbjct 2305 AACCACCATATTGTAATGAAGCAACATTAGCAATAATTTGTGAAACTTGAGCAGTTGCAG 2246 Query 39018 TTTGAATGGAATGAGGTGAACCGATTTCTGCATTACCCATTTTAAACCCGTTCTTCAACA 39077 ||||||||||| | || || | ||| |||||||| |||||||| || || | |||| Sbjct 2245 TTTGAATGGAACGGGGAGATTTAACTTCAGCATTACCAATTTTAAAACCATTAGTGAACA 2186 Query 39078 TATATTCAAAGTCAATCAAACAACAATTTGTCATTGGACGATAAGGTTGGTAGTCTAAAT 39137 | | || ||| |||| ||||| |||| || |||| | || | ||||| |||| Sbjct 2185 TTTCTTTAAAATCAACTAAACAGCAATACGTTTCTGGAGTAGCGGGGTAATAGTCCAAAT 2126 Query 39138 CGTGATAATGAATATCTCCACGTAAATGTGCGTTAGCTACATGAGGAGGGAGCATTTT 39195 | || |||||||||| ||||| | ||| || |||||||| ||| |||||||| Sbjct 2125 CATGCCAATGAATATCACCACGAAGATGGGCTTTAGCTACCATTTCAGGAAGCATTTT 2068 >seq146010 Length=1781 Score = 161 bits (178), Expect = 9e-35 Identities = 546/841 (65%), Gaps = 16/841 (2%) Strand=Plus/Plus Query 38325 GTTCTTCAAAAATTTCCCAGAAGACTTCTTT-ATCCCCTTCTGATTCAATAGCAATACGT 38383 ||| | ||| |||| |||| || | |||| ||| || | | |||||| ||||| || Sbjct 375 GTTATCCAATAATT-CCCAAAATT-TGCTTTCATCTCCATGGGCTTCAATTGCAATTCGC 432 Query 38384 GGTAAGTTAAGGGTTACTACTCCTAAATTCATACGACCAGAGTTTACTTCGTTTCCATGT 38443 |||||||| | ||| || |||||||| | || || | |||| || |||| | Sbjct 433 GGTAAGTTTAAACTTATGACACCTAAATTATTTCGTCCGTCATGAACTTGCTTGCCATCT 492 Query 38444 TCATCTTTCCATCCTTGTAAGAATGA-ACGACAACCCATAGGACATTTAAATGAACCTGT 38502 || || | || ||||| | ||| || ||||| || ||| |||||||| || Sbjct 493 TCCTCATATACGCC----AAGAAAGCTACGGCATCCCATTGGCGTTTTGAATGAACCCGT 548 Query 38503 TAGCTCAACAATTTTGTCATAGTTCAAAATATCAGGGTACATACGTTTAGCTGAACATTC 38562 || | | || | ||| || || || |||||||| ||||||||||| ||| || |||||| Sbjct 549 TACCGCGACCACTTTATCGTAATTTAAAATATCGGGGTACATACGCTTACTTGCACATTC 608 Query 38563 TAATGCTAACTGTTTTACTTCATAGTTAGGGTCTTCTGGTTTACGGTTAACTCCGTCTTT 38622 |||||| | | ||| | ||||| || || | ||| | ||||| || ||||| Sbjct 609 TAATGCGAGTTTTTTGATATCATAATTGATATCACCAACCTTATGATTAACGCCATCTTT 668 Query 38623 AATAGTGAACAATAATTTAGGGAAGATTGCTG-TACGTCCTTCTGTTCCTAGACCTTGGA 38681 || | |||| ||||| || || | ||||| | || |||| |||||| |||| | Sbjct 669 TATTGCAAACACCAATTTTGGAAAAACTGCTGTTTTGTGGTTCT-TTCCTAATCCTTTTA 727 Query 38682 TACGTACTTTAAAAATAGCTTTTTGGAT---TTCTCTTTCCCAACGTCCAGTACCTAAAC 38738 ||||| ||| ||||||| || |||||| | | |||||||| | ||||||| | Sbjct 728 AACGTATTTTTAAAATAGATTCTTGGATGAGTCGTGATTCCCAACTT---TTACCTAATC 784 Query 38739 CAAAACCAATAGACGTGAAAGGGGTCTGACCATTCGATGTAAATAACGTATTGATTTCAT 38798 |||| |||| | || || || |||||||| | || | || || | ||| | Sbjct 785 CAAAGCCAAATGTAACAAATGGCGTTTGACCATTAGCGGTGTGGAGTGTGTTCACTTCGT 844 Query 38799 ACTCTAGGCTTTGCATTGCATCGTAAATATCTTTGTTTGTTTTCTCGATTGCATATGTTT 38858 |||| || ||| | |||||| ||| ||||| | || | ||||||| | Sbjct 845 ACTCAAGAGATTGGAATGCATCATAACACTCTTTTTCAGTGCGATTTTTTGCATAGTGGT 904 Query 38859 CTGGTTCGGGAATACGGTAACGTTTAGCATCCGCCATATGTTTTTGATAATTCATTTCGG 38918 | || | || | | | | || | | |||||||||||||| | || Sbjct 905 CAGGATTTTTTATTTGCCACTCTGTCGCGACTTGCTTATGTTTTTGATAACTGATACTAA 964 Query 38919 CATAAGGTGCTAATACTTCATCAATGCGGTCAAATGAACAACCCCCATACTGACTGGAAG 38978 || | |||||||| ||||| || || | || || || || || | | | Sbjct 965 CAAATTTTGCTAATATCTCATCGATACGATTAATTGTCGTTCCACCGTAAATATGGCTTG 1024 Query 38979 CCACATTCGCAATAATTTGTGCTGTTTGTGCTGTAGCTGTTTGAATGGAATGAGGTGAAC 39038 |||| | ||||||||||| || || || || || ||| ||| || | ||| | Sbjct 1025 CCACCTGAGCAATAATTTGAGCCGTGACCGCGGTTGCCGTTGCAATAGATTTAGGCGGTT 1084 Query 39039 CGATTTCTGCATTACCCATTTTAAACCCGTTCTTCAACATATATTCAAAGTCAATCAAAC 39098 | ||||| || || ||||||||||| ||||| | | ||| || | || || || Sbjct 1085 CAATTTCGGCGTTGCCCATTTTAAAACCGTTGGTAAGCATGCCATCTAGATCGATTAACA 1144 Query 39099 AACAATTTGTCATTGGACGATAAGGTTGGTAGTCTAAATCGTGATAATGAATATCTCCAC 39158 ||||| ||||||| | | ||| || || ||||| ||||||||||| ||||||| Sbjct 1145 TGCAATTAAACATTGGAAAAAATGGTGCATAATCCAAATCATGATAATGAATTTCTCCAC 1204 Query 39159 G 39159 | Sbjct 1205 G 1205 >seq77851 Length=3946 Score = 129 bits (142), Expect = 6e-25 Identities = 138/181 (76%), Gaps = 1/181 (1%) Strand=Plus/Minus Query 37539 CATTAGGACGAGCTTGTGGTTGACCTAAATAACCACATTGTCTTTTAACAACATCACATG 37598 |||| ||||||||||| || | ||||||||||||||| ||||||||| |||||||| Sbjct 831 CATT-GGACGAGCTTGGGGATTACCTAAATAACCACAGGTTCTTTTAACCACATCACAAT 773 Query 37599 TTGCAGGGTCATTATTACCACATTGCGGGCATTCATAACCATCTGATGTAGGGTTAAACT 37658 | ||| |||| ||| |||||||| || |||||| ||||| | |||| ||||| | Sbjct 772 ATTTAGGATCATGATTTCCACATTGTGGACATTCAAAACCACGGGCGGTAGCTTTAAAGT 713 Query 37659 CTCCATCAAAACCGCATTCATGACATTTATCAATTGGGGTGTTTGTTCCAAGATAACCAA 37718 | || | ||| || |||| |||||||||||||| || || || || | |||||||| Sbjct 712 CACCTTTAAATCCACATTTGAAACATTTATCAATTGAAGTATTAGTACCTAAATAACCAA 653 Query 37719 C 37719 | Sbjct 652 C 652 Score = 107 bits (118), Expect = 2e-18 Identities = 165/225 (73%), Gaps = 14/225 (6%) Strand=Plus/Minus Query 37772 AGTTTAGGGTATTCTACA-TAATGGATAAAACCACCGGAAGCATATTTTGGAAACTCTTT 37830 || ||||| ||||| ||| ||||| |||||||| | || ||||| | ||| | ||| Sbjct 312 AGATTAGGATATTC-ACAGTAATGAATAAAACCGGCTGATGCATAATGTGGGTATGCTTC 254 Query 37831 TTCAAAA-TCAATCTTTTCAAAAGGTGTTGGAGCTTTGCGAACATCATAGTGGAAGCTAT 37889 |||||| | ||| |||||||| || | ||| ||| | |||||||||||| || |||| Sbjct 253 TTCAAAGGTTAAT-TTTTCAAATGGATTAGGACGTTTTCTAACATCATAGTGAAAACTAT 195 Query 37890 TTGTATAATATTCTTTATCTGTGATATTCTCAATAACT---CCGTATTTTTCTGTATC-- 37944 | || ||||||||||||||||| ||| || | ||| || |||||| |||| Sbjct 194 TAGTGTAATATTCTTTATCTGTAATA---TCTTTTACTTTGCCAAATTTTTTAATATCAT 138 Query 37945 CATGCGACAGAATCTATCAGTTAAACTTTCACTTGGTGTTGAGTA 37989 | || | || || ||||||||||| |||| ||||||||| || Sbjct 137 CTTGAG-CA-AAAGTATCAGTTAAAGATTCAGCTGGTGTTGAATA 95 >seq21678 Length=5369 Score = 96.9 bits (106), Expect = 3e-15 Identities = 173/250 (69%), Gaps = 12/250 (5%) Strand=Plus/Minus Query 62609 TCTAACTCAGCAAAAGAATGGATTGCACAAAAAGAATCTAGCGGTTCTTACTCAGCAACT 62668 ||||| || || ||||| ||||||||| | ||||| || ||||| || |||| | Sbjct 1724 TCTAATTCTGCTAAAGATTGGATTGCATCTCACGAATCAAGTGGTTCATATGGAGCATCA 1665 Query 62669 AACGGACGTTACATTGGACGTTACCAATTAG---ATGCTTCATACTTAAACGGTGACTAC 62725 || |||| || ||| || ||| || | ||||||| ||||||| ||||| Sbjct 1664 AATGGACAATATTATGGTAAATATCAAATATCCAAAGCTTCAT---TAAACGGGGACTAT 1608 Query 62726 TCACCAGAAAACCAAGAACGTGTAGCAGATGCTTATGTTGCAGGACGTTATGGTTCATGG 62785 || ||| ||||||||| | ||| ||| |||||| | |||||||||||||||| Sbjct 1607 TCTGCAGCTAACCAAGAAAGAACAGCTGATCAATATGTTCAATCACGTTATGGTTCATGG 1548 Query 62786 GAAAACGCACAAGCTTTCTGGTTAGCTAACGGTTGGTACTAAAATAATAAATACTAACAT 62845 || || || || |||||||| | || |||||||| | ||| | |||| | | Sbjct 1547 GACAATGCTAAATCTTTCTGGCAACAAAATGGTTGGTATT--AATTAGAAATGCCA---- 1494 Query 62846 ATTaaaaaaa 62855 |||||||||| Sbjct 1493 ATTAAAAAAA 1484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471293957055840