Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_029009.1
Length=147589
Score E
Sequences producing significant alignments: (Bits) Value
seq123113 188 7e-43
seq146010 161 9e-35
seq77851 129 6e-25
seq21678 96.9 3e-15
>seq123113
Length=2487
Score = 188 bits (208), Expect = 7e-43
Identities = 293/418 (70%), Gaps = 3/418 (1%)
Strand=Plus/Minus
Query 38781 ATAACGTATTGATTTCATACTCTAGGCTTTGCATTGCATCGTAAATATCTTTGTTTGTTT 38840
|||| |||||||||||||| |||| |||| | ||||| || ||||||| || ||
Sbjct 2485 ATAAAGTATTGATTTCATATTCTAATGATTGCGTGGCATCATAGATATCTTGTTTAGTAC 2426
Query 38841 TCTCGATTGCATATGTTTCTGGTTCGGGAATACGGTAACGTT---TAGCATCCGCCATAT 38897
| || | || |||| |||| |||| | || | || ||||| || | |
Sbjct 2425 TTTCTTTAGCGTATGATTCTTGTTCATCTTCAGGGACCCATTCTTTAGCAACCTTAAGGT 2366
Query 38898 GTTTTTGATAATTCATTTCGGCATAAGGTGCTAATACTTCATCAATGCGGTCAAATGAAC 38957
| |||||||| || ||||| ||| | || ||||| |||||||| || ||||| ||
Sbjct 2365 GCTTTTGATAGTTAATTTCAGCAAATGGGGCTAACACTTCATCGGCACGATCAAAAGATA 2306
Query 38958 AACCCCCATACTGACTGGAAGCCACATTCGCAATAATTTGTGCTGTTTGTGCTGTAGCTG 39017
|||| ||||| || ||||| ||||| ||||||||||||| ||| || || || |
Sbjct 2305 AACCACCATATTGTAATGAAGCAACATTAGCAATAATTTGTGAAACTTGAGCAGTTGCAG 2246
Query 39018 TTTGAATGGAATGAGGTGAACCGATTTCTGCATTACCCATTTTAAACCCGTTCTTCAACA 39077
||||||||||| | || || | ||| |||||||| |||||||| || || | ||||
Sbjct 2245 TTTGAATGGAACGGGGAGATTTAACTTCAGCATTACCAATTTTAAAACCATTAGTGAACA 2186
Query 39078 TATATTCAAAGTCAATCAAACAACAATTTGTCATTGGACGATAAGGTTGGTAGTCTAAAT 39137
| | || ||| |||| ||||| |||| || |||| | || | ||||| ||||
Sbjct 2185 TTTCTTTAAAATCAACTAAACAGCAATACGTTTCTGGAGTAGCGGGGTAATAGTCCAAAT 2126
Query 39138 CGTGATAATGAATATCTCCACGTAAATGTGCGTTAGCTACATGAGGAGGGAGCATTTT 39195
| || |||||||||| ||||| | ||| || |||||||| ||| ||||||||
Sbjct 2125 CATGCCAATGAATATCACCACGAAGATGGGCTTTAGCTACCATTTCAGGAAGCATTTT 2068
>seq146010
Length=1781
Score = 161 bits (178), Expect = 9e-35
Identities = 546/841 (65%), Gaps = 16/841 (2%)
Strand=Plus/Plus
Query 38325 GTTCTTCAAAAATTTCCCAGAAGACTTCTTT-ATCCCCTTCTGATTCAATAGCAATACGT 38383
||| | ||| |||| |||| || | |||| ||| || | | |||||| ||||| ||
Sbjct 375 GTTATCCAATAATT-CCCAAAATT-TGCTTTCATCTCCATGGGCTTCAATTGCAATTCGC 432
Query 38384 GGTAAGTTAAGGGTTACTACTCCTAAATTCATACGACCAGAGTTTACTTCGTTTCCATGT 38443
|||||||| | ||| || |||||||| | || || | |||| || |||| |
Sbjct 433 GGTAAGTTTAAACTTATGACACCTAAATTATTTCGTCCGTCATGAACTTGCTTGCCATCT 492
Query 38444 TCATCTTTCCATCCTTGTAAGAATGA-ACGACAACCCATAGGACATTTAAATGAACCTGT 38502
|| || | || ||||| | ||| || ||||| || ||| |||||||| ||
Sbjct 493 TCCTCATATACGCC----AAGAAAGCTACGGCATCCCATTGGCGTTTTGAATGAACCCGT 548
Query 38503 TAGCTCAACAATTTTGTCATAGTTCAAAATATCAGGGTACATACGTTTAGCTGAACATTC 38562
|| | | || | ||| || || || |||||||| ||||||||||| ||| || ||||||
Sbjct 549 TACCGCGACCACTTTATCGTAATTTAAAATATCGGGGTACATACGCTTACTTGCACATTC 608
Query 38563 TAATGCTAACTGTTTTACTTCATAGTTAGGGTCTTCTGGTTTACGGTTAACTCCGTCTTT 38622
|||||| | | ||| | ||||| || || | ||| | ||||| || |||||
Sbjct 609 TAATGCGAGTTTTTTGATATCATAATTGATATCACCAACCTTATGATTAACGCCATCTTT 668
Query 38623 AATAGTGAACAATAATTTAGGGAAGATTGCTG-TACGTCCTTCTGTTCCTAGACCTTGGA 38681
|| | |||| ||||| || || | ||||| | || |||| |||||| |||| |
Sbjct 669 TATTGCAAACACCAATTTTGGAAAAACTGCTGTTTTGTGGTTCT-TTCCTAATCCTTTTA 727
Query 38682 TACGTACTTTAAAAATAGCTTTTTGGAT---TTCTCTTTCCCAACGTCCAGTACCTAAAC 38738
||||| ||| ||||||| || |||||| | | |||||||| | ||||||| |
Sbjct 728 AACGTATTTTTAAAATAGATTCTTGGATGAGTCGTGATTCCCAACTT---TTACCTAATC 784
Query 38739 CAAAACCAATAGACGTGAAAGGGGTCTGACCATTCGATGTAAATAACGTATTGATTTCAT 38798
|||| |||| | || || || |||||||| | || | || || | ||| |
Sbjct 785 CAAAGCCAAATGTAACAAATGGCGTTTGACCATTAGCGGTGTGGAGTGTGTTCACTTCGT 844
Query 38799 ACTCTAGGCTTTGCATTGCATCGTAAATATCTTTGTTTGTTTTCTCGATTGCATATGTTT 38858
|||| || ||| | |||||| ||| ||||| | || | ||||||| |
Sbjct 845 ACTCAAGAGATTGGAATGCATCATAACACTCTTTTTCAGTGCGATTTTTTGCATAGTGGT 904
Query 38859 CTGGTTCGGGAATACGGTAACGTTTAGCATCCGCCATATGTTTTTGATAATTCATTTCGG 38918
| || | || | | | | || | | |||||||||||||| | ||
Sbjct 905 CAGGATTTTTTATTTGCCACTCTGTCGCGACTTGCTTATGTTTTTGATAACTGATACTAA 964
Query 38919 CATAAGGTGCTAATACTTCATCAATGCGGTCAAATGAACAACCCCCATACTGACTGGAAG 38978
|| | |||||||| ||||| || || | || || || || || | | |
Sbjct 965 CAAATTTTGCTAATATCTCATCGATACGATTAATTGTCGTTCCACCGTAAATATGGCTTG 1024
Query 38979 CCACATTCGCAATAATTTGTGCTGTTTGTGCTGTAGCTGTTTGAATGGAATGAGGTGAAC 39038
|||| | ||||||||||| || || || || || ||| ||| || | ||| |
Sbjct 1025 CCACCTGAGCAATAATTTGAGCCGTGACCGCGGTTGCCGTTGCAATAGATTTAGGCGGTT 1084
Query 39039 CGATTTCTGCATTACCCATTTTAAACCCGTTCTTCAACATATATTCAAAGTCAATCAAAC 39098
| ||||| || || ||||||||||| ||||| | | ||| || | || || ||
Sbjct 1085 CAATTTCGGCGTTGCCCATTTTAAAACCGTTGGTAAGCATGCCATCTAGATCGATTAACA 1144
Query 39099 AACAATTTGTCATTGGACGATAAGGTTGGTAGTCTAAATCGTGATAATGAATATCTCCAC 39158
||||| ||||||| | | ||| || || ||||| ||||||||||| |||||||
Sbjct 1145 TGCAATTAAACATTGGAAAAAATGGTGCATAATCCAAATCATGATAATGAATTTCTCCAC 1204
Query 39159 G 39159
|
Sbjct 1205 G 1205
>seq77851
Length=3946
Score = 129 bits (142), Expect = 6e-25
Identities = 138/181 (76%), Gaps = 1/181 (1%)
Strand=Plus/Minus
Query 37539 CATTAGGACGAGCTTGTGGTTGACCTAAATAACCACATTGTCTTTTAACAACATCACATG 37598
|||| ||||||||||| || | ||||||||||||||| ||||||||| ||||||||
Sbjct 831 CATT-GGACGAGCTTGGGGATTACCTAAATAACCACAGGTTCTTTTAACCACATCACAAT 773
Query 37599 TTGCAGGGTCATTATTACCACATTGCGGGCATTCATAACCATCTGATGTAGGGTTAAACT 37658
| ||| |||| ||| |||||||| || |||||| ||||| | |||| ||||| |
Sbjct 772 ATTTAGGATCATGATTTCCACATTGTGGACATTCAAAACCACGGGCGGTAGCTTTAAAGT 713
Query 37659 CTCCATCAAAACCGCATTCATGACATTTATCAATTGGGGTGTTTGTTCCAAGATAACCAA 37718
| || | ||| || |||| |||||||||||||| || || || || | ||||||||
Sbjct 712 CACCTTTAAATCCACATTTGAAACATTTATCAATTGAAGTATTAGTACCTAAATAACCAA 653
Query 37719 C 37719
|
Sbjct 652 C 652
Score = 107 bits (118), Expect = 2e-18
Identities = 165/225 (73%), Gaps = 14/225 (6%)
Strand=Plus/Minus
Query 37772 AGTTTAGGGTATTCTACA-TAATGGATAAAACCACCGGAAGCATATTTTGGAAACTCTTT 37830
|| ||||| ||||| ||| ||||| |||||||| | || ||||| | ||| | |||
Sbjct 312 AGATTAGGATATTC-ACAGTAATGAATAAAACCGGCTGATGCATAATGTGGGTATGCTTC 254
Query 37831 TTCAAAA-TCAATCTTTTCAAAAGGTGTTGGAGCTTTGCGAACATCATAGTGGAAGCTAT 37889
|||||| | ||| |||||||| || | ||| ||| | |||||||||||| || ||||
Sbjct 253 TTCAAAGGTTAAT-TTTTCAAATGGATTAGGACGTTTTCTAACATCATAGTGAAAACTAT 195
Query 37890 TTGTATAATATTCTTTATCTGTGATATTCTCAATAACT---CCGTATTTTTCTGTATC-- 37944
| || ||||||||||||||||| ||| || | ||| || |||||| ||||
Sbjct 194 TAGTGTAATATTCTTTATCTGTAATA---TCTTTTACTTTGCCAAATTTTTTAATATCAT 138
Query 37945 CATGCGACAGAATCTATCAGTTAAACTTTCACTTGGTGTTGAGTA 37989
| || | || || ||||||||||| |||| ||||||||| ||
Sbjct 137 CTTGAG-CA-AAAGTATCAGTTAAAGATTCAGCTGGTGTTGAATA 95
>seq21678
Length=5369
Score = 96.9 bits (106), Expect = 3e-15
Identities = 173/250 (69%), Gaps = 12/250 (5%)
Strand=Plus/Minus
Query 62609 TCTAACTCAGCAAAAGAATGGATTGCACAAAAAGAATCTAGCGGTTCTTACTCAGCAACT 62668
||||| || || ||||| ||||||||| | ||||| || ||||| || |||| |
Sbjct 1724 TCTAATTCTGCTAAAGATTGGATTGCATCTCACGAATCAAGTGGTTCATATGGAGCATCA 1665
Query 62669 AACGGACGTTACATTGGACGTTACCAATTAG---ATGCTTCATACTTAAACGGTGACTAC 62725
|| |||| || ||| || ||| || | ||||||| ||||||| |||||
Sbjct 1664 AATGGACAATATTATGGTAAATATCAAATATCCAAAGCTTCAT---TAAACGGGGACTAT 1608
Query 62726 TCACCAGAAAACCAAGAACGTGTAGCAGATGCTTATGTTGCAGGACGTTATGGTTCATGG 62785
|| ||| ||||||||| | ||| ||| |||||| | ||||||||||||||||
Sbjct 1607 TCTGCAGCTAACCAAGAAAGAACAGCTGATCAATATGTTCAATCACGTTATGGTTCATGG 1548
Query 62786 GAAAACGCACAAGCTTTCTGGTTAGCTAACGGTTGGTACTAAAATAATAAATACTAACAT 62845
|| || || || |||||||| | || |||||||| | ||| | |||| | |
Sbjct 1547 GACAATGCTAAATCTTTCTGGCAACAAAATGGTTGGTATT--AATTAGAAATGCCA---- 1494
Query 62846 ATTaaaaaaa 62855
||||||||||
Sbjct 1493 ATTAAAAAAA 1484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471293957055840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |