Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_029073.1 Length=141298 Score E Sequences producing significant alignments: (Bits) Value seq145349 327 1e-84 >seq145349 Length=1181 Score = 327 bits (362), Expect = 1e-84 Identities = 547/789 (69%), Gaps = 4/789 (1%) Strand=Plus/Minus Query 48699 TCCTTTTAATACTTGAATAGCCTCTTTGACTTCATTTGCATTTCCCACTTCATATCCTAA 48758 |||||||||| | || || ||||| | || |||||| || | || | |||| Sbjct 1095 TCCTTTTAATGTGTCGATGGCTTCTTTTAGCTCGAGTGCATTACCGATAGCAAAACCTAG 1036 Query 48759 TGGCTGATTCATATCTGTAATGACTGCAATTGTTTTTCGATTCAGATTTTTTCCAATATC 48818 ||||| |||||| | ||| | ||| || || ||| | || || ||||||| Sbjct 1035 CGGCTGTGACATATCAGAAATAATTGCCATGGTGCGACGACCGATGTTATTGCCAATATT 976 Query 48819 AACCATTTCTTGTGCTAATGCTTTAGAG--TCTTCTAATGTTTTCATAAATGCTCCATTT 48876 ||||| ||| || | | ||||| | ||||| ||| ||||| || || |||| Sbjct 975 TACCATAGCTTTAGCAAGT--TTTAGCGCCTCTTCATCTGTCTTCATGAAAGCGCCATCA 918 Query 48877 CCTGTTTTAACATCTAATACAATTGCATCTGCTCCCATTGCGAtttttttACTCATAATG 48936 || |||||||| || | |||||||||||||||||| ||| | |||||||||||| ||| Sbjct 917 CCCGTTTTAACGTCAAGCACAATTGCATCTGCTCCCGCTGCTAATTTTTTACTCATGATG 858 Query 48937 CTACTAGCAATTAATGGAATTGAATTAACTGTTCCAGTAACATCGCGTAATGCATATAAT 48996 || ||||| | || || ||||| || || || || ||||| || || ||||| | | Sbjct 857 GAGCTTGCAATAAGCGGGATCGAATTGACAGTACCTGTTACATCACGCAAAGCATACAGT 798 Query 48997 TTTTTGTCGGCAGGCACTAAAATTCCACTTTGTCCAACTAATGCGATTTTATGTGTATTA 49056 ||||| || || || |||| | || ||| |||| | || | | || || Sbjct 797 TTTTTATCAGCCGGGGTTAAATTACCTGATTGACCAATAACAGCAACGCCTTTGGTGTTG 738 Query 49057 ACTTGATTAATAAATTGTTCTCTTGTTAATTCTACGTTAAAGCCTTGTATAGATTCTAAT 49116 || |||| ||||||||||||| | | | ||| | ||||| ||| | || ||||| ||| Sbjct 737 ACCTGATCAATAAATTGTTCTTTGCTGACTTCAATTTTAAAACCTGGAATGGATTCAAAT 678 Query 49117 TTGTCAATTGTTCCTCCTGTGTGCCCTAAACCTCTACCTGACATTTTAGCAACAGGAATA 49176 || || | || || ||||| || ||||| |||| ||| |||||||||||||| || | | Sbjct 677 TTATCTGTAGTGCCACCTGTATGACCTAATCCTCGACCAGACATTTTAGCAACGGGCACA 618 Query 49177 CCCAAAGAAGCAACCAATGGAGCAACGATTAAACTAATTTTATCGCCGACTCCACCTGTG 49236 | |||| |||||| | || || | | | | || ||||||| || || || || Sbjct 617 TCTAAAGCAGCAACTAGCGGGGCTAACACAAGTGTTGTTGTATCGCCAACGCCGCCAGTT 558 Query 49237 GAATGTTTATCTACTTTTACACCTTCGATTTTTGATAGGTCAATTGTTTCACCAGAATTA 49296 ||||||||||| ||||| | |||| ||||| |||| ||| || ||||| ||||| | Sbjct 557 GAATGTTTATCAACTTTAATGCCTTTTATTTTCGATAAGTCTATGGTTTCGCCAGAGTAC 498 Query 49297 ATCATGGCATTAGTTAAGGCAGAGATTTCTTCTTTAGACATGCCATTGAAATAAATTGCC 49356 ||||| ||||| || | ||| |||| || | |||||| | ||||||||| ||| Sbjct 497 ATCATCGCATTTGTCAGATCAGCACACTCTTTTTCGGTCATGCCTTGGAAATAAATGGCC 438 Query 49357 ATTAACATAGAAGCCATTTGATAATCAGGAATGTCGCCGTTCGTGTAACCGCGGATGATA 49416 || || | | | | ||||||||| ||||| || ||||| || ||| || | Sbjct 437 ATCAAAAGTGCACTAACTTGATAATCTGGAATCTCACCGTTTGTATAATTCGTAATAAAG 378 Query 49417 AAATCAATTTCTTCTTTTGAAAGCTCATAACCATCCCGTTTTTTCGCAATTAAATCGACC 49476 || | || |||||| ||||||| ||| ||||| |||||||| |||| | ||| || Sbjct 377 AAGTTTATCTCTTCTGTTGAAAGTTCACCGCCATCGCGTTTTTTTTCAATAATATCAACA 318 Query 49477 ATTCTCATG 49485 ||||||||| Sbjct 317 ATTCTCATG 309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451199545817280