Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_029091.1 Length=168771 Score E Sequences producing significant alignments: (Bits) Value seq146010 102 9e-17 >seq146010 Length=1781 Score = 102 bits (112), Expect = 9e-17 Identities = 410/641 (64%), Gaps = 4/641 (1%) Strand=Plus/Minus Query 138957 GCACATGAAAGCGGAATTATCCATTTCCACGATATTGATTATTCCCCTGCTCTTCCGTTT 139016 || ||||| | ||| || |||| || ||| | |||||| | || | |||| | Sbjct 1214 GCCCATGACCGTGGAGAAATTCATTATCATGATTTGGATTATGCACCATTTTTTCCAATG 1155 Query 139017 ACTAATTGCTGTTTAGTCGATTTAAAGGGGATGCTTGAGAACGGATTTAAATTAGGCAAT 139076 ||||||| ||| ||||| || | || |||||| ||||| |||||| | ||||| Sbjct 1154 TTTAATTGCATGTTAATCGATCTAGATGGCATGCTTACCAACGGTTTTAAAATGGGCAAC 1095 Query 139077 GCTCAAATTGAAACGCCTAAATCTATTGGCGTTGCTACTGCAATTATGGCACAAATTACT 139136 || |||||||| ||||||||||||||| || || || | | ||| ||||||| | Sbjct 1094 GCCGAAATTGAACCGCCTAAATCTATTGCAACGGCAACCGCGGTCACGGCTCAAATTATT 1035 Query 139137 GCNNAAGTTGCTTCCCATCAATACGGCGGAACGACTTTTGCTAATGTAGATAAAGTACTT 139196 || | || || |||| ||||| |||||||| || | | | ||| | || | Sbjct 1034 GCTCAGGTGGCAAGCCATATTTACGGTGGAACGACAATTAATCGTATCGATGAGATATTA 975 Query 139197 TCTCCTTATGTTAAACGCACCTATGCAAAACATATTGAGGATGCAGAAAAATGGCAAATC 139256 | | ||||| || ||| |||||||| | | || | | |||||||| Sbjct 974 GCAAAATTTGTTAGTATCAGTTATCAAAAACATAAGCAAGTCGCGACAGAGTGGCAAATA 915 Query 139257 GCTGATGCGTTAAATTATGCTCAATCTAAAACAGAAAAAGACGTATACGATGCATTCCAA 139316 || | | ||||| || | || |||||||| || |||||||||||| Sbjct 914 AAAAATCCTGACCACTATGCAAAAAATCGCACTGAAAAAGAGTGTTATGATGCATTCCAA 855 Query 139317 GCTTATGAATATGAAGTAAATACTCTCTTTAGTTCAAACGGACAAACGCCTTTTGTAACA 139376 || ||| || ||||| || || ||| | | || || |||||||| ||||| ||| Sbjct 854 TCTCTTGAGTACGAAGTGAACACACTCCACACCGCTAATGGTCAAACGCCATTTGTTACA 795 Query 139377 ATTACATTTGG-TACGGGAACTGACTGGACTGAACGAATGATTCAGAAAGCAATTCTGAA 139435 || ||||| | || || | ||| | |||| | || || || | ||| | || Sbjct 794 TTTGGCTTTGGATTAGGTAAAAGTTGGGAAT-CACGACTCATCCAAGAATCTATTTTAAA 736 Query 139436 AAATCGTATTAAAGGTCTTGGTCGTGATGGGATAACTCCTATTTTTCCTAAACTTGTTAT 139495 || ||| | ||||| | || | | ||| | ||||||| ||| ||| | | Sbjct 735 AATACGTTTAAAAGGATTAGGAAAGAACCACAAAACAGCAGTTTTTCC-AAAATTGGTGT 677 Query 139496 GTTC-GTTGAAGAAGGTGTTAATCTTTATAAAGACGATCCGAACTATGATATTAAGCAGC 139554 | | | |||| || ||||||| | | | ||| || |||||||| || | | Sbjct 676 TTGCAATAAAAGATGGCGTTAATCATAAGGTTGGTGATATCAATTATGATATCAAAAAAC 617 Query 139555 TTGCGTTAGAATGTGCAAGCAAAAGAATGTATCCTGACATT 139595 | || |||||||||||||| || | ||||| || || ||| Sbjct 616 TCGCATTAGAATGTGCAAGTAAGCGTATGTACCCCGATATT 576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538952488108960