Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq2700 131 4e-25
seq59601 84.2 5e-11
>seq2700
Length=7766
Score = 131 bits (144), Expect = 4e-25
Identities = 132/172 (77%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| | |||||||| ||| | || || || |||||||| || ||||||||| | || ||
Sbjct 6227 CCAAATCTACAACGTAATTGTAACCGCTCACGCCTTTGTAATAATTTTCTTTATAGTGAT 6168
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670
|| |||| || || || |||||||||||||| || ||| |||| | || ||||||||
Sbjct 6167 ACCAATTATAATTGGAGGGTTCGGAAATTGATTAGTGCCTCTAATACTCGGAGCTCCTGA 6108
Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCC 7722
||| || ||||| | | ||||||||||| || ||| |||| || || |||
Sbjct 6107 TATAGCATTTCCTCGAATAAACAATATAAGCTTCTGAATACTTCCTCCATCC 6056
Score = 100 bits (110), Expect = 7e-16
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| ||| ||||||||||||||||||||||| |||||||| | || || || || || |
Sbjct 5650 ATACTTCTGGATGACCAAAAAATCAGAATAAGTGTTGATATAAAATGGGGTCTCCACCAC 5709
Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772
|||| || |||||||| ||| || || |||| |||||||||||
Sbjct 5710 CTGAAGGGTCAAAAAATGAAGTGTTCAAGTTTCGATCAGTTAAAA 5754
>seq59601
Length=2262
Score = 84.2 bits (92), Expect = 5e-11
Identities = 102/139 (73%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 225578 CGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCA 225637
|||| || | || ||||| || || ||||| ||||| ||||| |||||||| || |
Sbjct 2262 CGAAAATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTAA 2203
Query 225638 CAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTT 225697
|| ||||||||| || |||| ||||| || | ||||| ||||||||||| | || |
Sbjct 2202 CATTTTCGATGGTATCGGAGGGCTCCACCTCAAGGGTGATAGTCTTGCCCGTAAGGGTCT 2143
Query 225698 TTATGAACACTTGCATTTT 225716
| | ||| | ||||| ||
Sbjct 2142 TAACGAAAATCTGCATCTT 2124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1190297426580024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |