Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2700 131 4e-25 seq59601 84.2 5e-11 >seq2700 Length=7766 Score = 131 bits (144), Expect = 4e-25 Identities = 132/172 (77%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| | |||||||| ||| | || || || |||||||| || ||||||||| | || || Sbjct 6227 CCAAATCTACAACGTAATTGTAACCGCTCACGCCTTTGTAATAATTTTCTTTATAGTGAT 6168 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 || |||| || || || |||||||||||||| || ||| |||| | || |||||||| Sbjct 6167 ACCAATTATAATTGGAGGGTTCGGAAATTGATTAGTGCCTCTAATACTCGGAGCTCCTGA 6108 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCC 7722 ||| || ||||| | | ||||||||||| || ||| |||| || || ||| Sbjct 6107 TATAGCATTTCCTCGAATAAACAATATAAGCTTCTGAATACTTCCTCCATCC 6056 Score = 100 bits (110), Expect = 7e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||| ||||||||||||||||||||||| |||||||| | || || || || || | Sbjct 5650 ATACTTCTGGATGACCAAAAAATCAGAATAAGTGTTGATATAAAATGGGGTCTCCACCAC 5709 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 |||| || |||||||| ||| || || |||| ||||||||||| Sbjct 5710 CTGAAGGGTCAAAAAATGAAGTGTTCAAGTTTCGATCAGTTAAAA 5754 >seq59601 Length=2262 Score = 84.2 bits (92), Expect = 5e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 225578 CGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCA 225637 |||| || | || ||||| || || ||||| ||||| ||||| |||||||| || | Sbjct 2262 CGAAAATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTAA 2203 Query 225638 CAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTT 225697 || ||||||||| || |||| ||||| || | ||||| ||||||||||| | || | Sbjct 2202 CATTTTCGATGGTATCGGAGGGCTCCACCTCAAGGGTGATAGTCTTGCCCGTAAGGGTCT 2143 Query 225698 TTATGAACACTTGCATTTT 225716 | | ||| | ||||| || Sbjct 2142 TAACGAAAATCTGCATCTT 2124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1190297426580024