Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq25219 118 9e-22 >seq25219 Length=1370 Score = 118 bits (130), Expect = 9e-22 Identities = 272/405 (67%), Gaps = 6/405 (1%) Strand=Plus/Minus Query 4373 AAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAAT 4432 ||||| ||||| ||||||||||| ||||| || ||| ||||||||||| ||||| || Sbjct 568 AAGCAGACGGTCGGCTACAAATTCAATATATTGAGACATAAGTTCGCAGTTCATTCCGAT 509 Query 4433 TAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | | || || || |||| ||| || || ||||| || || | || ||||| | ||| Sbjct 508 AAGATTGACGGGCAGAGCGTCTGTTAAGAATTCTTGCTCAATCTTGACTGCTTCAGCGAT 449 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 || ||| | || || || |||||| | || || | |||| | ||| || Sbjct 448 GATGTCTATGATGCGTTCCTTGCTTGGTTTCTGCACCAAATGCTTGAACATCAGACAAGC 389 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 || || ||||| | || ||||| | |||||| ||||| || || || | ||||| Sbjct 388 GAAGTCGCAATGGAGTCCCTCGTCGCGTGAAATCAGCTCGTTGGAGAATGTAAGACCGGG 329 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAA--TGACCCAGAAAAGAATATG 4670 ||| | ||| | ||| || ||||| || || | || || || | | | ||||| || Sbjct 328 CATGAGACCGCGCTTCTTCAGCCAGAAGATTGATGCGAAGCTGCCGCTG--AAGAAAATC 271 Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTA-AT 4729 ||||| || || ||||| || | | || ||||| || ||| ||| | || Sbjct 270 CCTTCAACTGCAGCAAATGCAATGATACGTTCACCGAAGTTTGCGGACTTG-CTTGAGAT 212 Query 4730 CCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGT 4774 |||| | |||||||| ||| || ||||| || || || | ||| Sbjct 211 CCATGCAAGTGCCCAGTCAGCCTTCTTCTTCACACATGGGAGTGT 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426288698503268