Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_031020.1
Length=163201
Score E
Sequences producing significant alignments: (Bits) Value
seq145875 120 3e-22
seq145812 118 1e-21
>seq145875
Length=1531
Score = 120 bits (132), Expect = 3e-22
Identities = 244/350 (70%), Gaps = 18/350 (5%)
Strand=Plus/Minus
Query 137292 GTTCCGCATAATATGAGTATAAGAACGAGAATGAATTGTTTCGCTGAATGTCCATGTTTG 137351
||| || |||||||| |||||||| || || || || ||||| |||| ||| ||||
Sbjct 1359 GTTACGAATAATATGGGTATAAGATCGCGAGTGGATAGTTTCTGAAAATGACCACGTTTC 1300
Query 137352 AACCCATGTTTCAAAGCC-GACATCAGAGATCAACGGCGCAAATGCCAGAGCTGGAGCTC 137410
|||||| ||||||| | | || | | || || |||| ||| | | ||| |
Sbjct 1299 AACCCAAGTTTCAAGCTCAGGTATTGAAATTAAAGGGAGCAA-TGCGACATTCGGACTGC 1241
Query 137411 GTCCTTGAATAGAATCAAGCAGTGTCTGATATTTTAAGTTATCGGTAAAAATACCCTTTT 137470
|||||||||| ||||| || | || ||||||||||||||| | |||||||| ||||
Sbjct 1240 GTCCTTGAATCGAATCCAGTAAAGTTTGATATTTTAAGTTACTGATAAAAATATGTTTTT 1181
Query 137471 CATGTTCCTGTAATTTATCGTACT-GA-GCCTTATCGGTCATTAACGAAACTTCTTCTGG 137528
||||||| | | | | | || | || | | | | | || | |||||||||||
Sbjct 1180 CATGTTCAGGAAGTCCAGCATAATCGATTCGATCTTGTGAAATATC--CACTTCTTCTGG 1123
Query 137529 CCGCCAGAAAAAA-CTAAGGGCCTTTTCAGTAAGTCCTTCAAACATTTTATGTTTTACTG 137587
|||||| |||||| ||| | ||||||| | ||| |||||| |||| || |||| ||
Sbjct 1122 CCGCCAAAAAAAAGATAACTG-CTTTTCAATTAGTTTTTCAAAAATTTCATATTTT--TG 1066
Query 137588 TT--TCGTATCGTGCAA---TACCCGTAGATTCACCCAGAATCATCGGTT 137632
|| || || || |||| || || |||| || |||| ||||||||
Sbjct 1065 TTGATCATAACGCGCAACATTAACC---GATTGTCCAAGAAACATCGGTT 1019
>seq145812
Length=1452
Score = 118 bits (130), Expect = 1e-21
Identities = 65/65 (100%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 66410 CCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAGCTGAG 66469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9 CCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAGCTGAG 68
Query 66470 CTAAG 66474
|||||
Sbjct 69 CTAAG 73
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521161060577760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |