Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq79726 365 6e-96 seq25219 158 2e-33 >seq79726 Length=8148 Score = 365 bits (404), Expect = 6e-96 Identities = 988/1494 (66%), Gaps = 32/1494 (2%) Strand=Plus/Plus Query 76771 TCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATAC 76830 |||| |||| || ||||| || | | | ||| || ||||| ||||| |||||||| | Sbjct 3805 TCTTGTCCACAGTGAACTGGATCGCATGTGCTGCCGGCTTTGTGCGTAGGTAGTACATGC 3864 Query 76831 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAG 76890 |||| || || ||| |||| ||| |||| || || |||| ||| || | | Sbjct 3865 CAGTCTTGAGGCCCGCCTTCCAGCCGAAGAAGTGAATCGAAGTCAATTTTCCGTAGTTCG 3924 Query 76891 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 76950 | || || | |||||| || | ||| ||||||||||||||||| || || ||||| || | Sbjct 3925 GTTCAGCCACATGAATGTTGAACGATTGACTTTGATCGATGAACGCGCCCCTATCGGCAG 3984 Query 76951 CCATTTTTATAATGGTCTTTTGAG--GA-ATTTCCCAAATAGTTTTGAAAACTTGTTTGA 77007 ||||||| ||||||| | || || ||||| | ||| ||| | | | || Sbjct 3985 CCATTTT---AATGGTCGACCGCACCGATATCTCCCACACAGTCTTGTACAGCTCACGGA 4041 Query 77008 TATCATCTGGAAG--GTTTGTATTT--TGAATGGAACCACCATCTGATATAATTGTATTC 77063 | || | ||||| | | | |||| || || || || | | || || ||| |||| Sbjct 4042 TTTCTTGTGGAATTCGCTCG-ATTTGCTGGATTGATCCTCGTTGTGCGATGATTTCATTC 4100 Query 77064 TTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACT 77123 || || ||||| | |||||| | | ||| || | | | |||| || || |||| || Sbjct 4101 TTCATGTCATCGTCCCACAAGTCCAACTCAGTGAGATCCTTAAGTAGGTGTTGATTGACG 4160 Query 77124 ATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACA 77183 ||||| || || ||||||| || | | |||| || || || || || || | Sbjct 4161 ATTTGGAACTCGCCAGACAGGACACGCCTGTTGTAGATGTTCGATGTGTACGGCTCAAAC 4220 Query 77184 GATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAA 77243 ||||| ||||| || | ||||| || |||||||| || ||||| || || | || | Sbjct 4221 GATTCGTTGTTGCCAAGGATTTGCGCTGTAGAAGCTGTCGGCATTGGAGCAATCAGGAGC 4280 Query 77244 CTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCT 77303 || || | ||| || | ||||| || || ||| ||||||||| ||||| Sbjct 4281 GAGTTCCTAACACCGTGCTTAGCAATTTTCTCCTTCAGAGCAGCCCAATCCCACAGATCA 4340 Query 77304 GAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTA 77363 | ||| | | ||| | ||||| || || ||||| |||||| | | || | | Sbjct 4341 GTTGGTTCCTTGTTCCACATGTCGTACTGAAGTATTCCCTTACTAACGGGACAACCCTCA 4400 Query 77364 TATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAA 77423 || ||||| || ||||| | || || |||||||| || || || | |||||| || Sbjct 4401 TAGGTTTCGTATGGTCCAAGCTTCTCGGCCAGTTCACAGCTTGCCTCTAGTGCTCCATAG 4460 Query 77424 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAA 77483 || || |||||||| || | | |||||| ||| | || || || | ||||| Sbjct 4461 TAGATGGTTTCGAAGATTTGTTGGTTGAGAAGTTGCGATTGTTCGCTCTCGTATGGATAG 4520 Query 77484 TGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTC 77543 | | ||||| | || || || ||||| ||||| || || || || || | |||| Sbjct 4521 CGCATCAGAATGAGTGCGTCGGCGAATCCTTGAACACCGATTCCGATTGGGCGGTGTCGT 4580 Query 77544 TTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGA 77603 | || || | || || ||||| || || || |||| | ||| || ||||| || | Sbjct 4581 GTGTTTGATTTCTTCGCCTCTGGCATTGGGTAGAAATTGACGTCAATTATTTTGTTCAAG 4640 Query 77604 TTTC---TAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCC-ATC 77659 || | | |||| |||| || | ||| | || | ||||| | |||| ||| Sbjct 4641 TTGCGGGTCACAAT--CTTTGTG-ACTTGCTTCAACTTCTGGAAATCGTA-CTTCTTATC 4696 Query 77660 TATA---ACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGC 77716 | || |||||||||| || || || || | || ||||| || | ||||| | Sbjct 4697 GGGAGTGACGAACATGTTCAGCGCAATGGAAGCCAAGTTGCAAACAGCAATCTCATCCGG 4756 Query 77717 GTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTG 77776 || || | | ||||| || || |||||||| || ||||| ||||| | || || Sbjct 4757 TGCGGAGTACTCGACAATCTCAGTGCAAAGATTACTGCACTTGATGGTGCCGATGTTCTG 4816 Query 77777 TTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAAT 77836 ||| ||| ||| ||||| | || || || || || ||||||| ||||| || | Sbjct 4817 TTGATTGGACTTGCGGTTGCAAGCATCTTTGTAGAGCATGTACGGAGTTCCGGTCTCCAC 4876 Query 77837 CTGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATCATAGATTTGTATCGCC 77895 || ||||| ||||| | ||| | || | | ||||| || || | ||| | ||| Sbjct 4877 TTGAGATTCTATAATGGCAAACCAAAGCGTTTGT-GCTTT---CACAGTTCTGTTT-GCC 4931 Query 77896 TCTCTCTT----TCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCC 77951 | || || || || | || || ||| || || | || ||||| || |||| | Sbjct 4932 TTTCCCTCCTTCTCGTAACGGGTGTACAGCTCCTCGAACTTCTCCCCCCAGACTTCATGC 4991 Query 77952 AATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTC 78011 || || ||||| | || |||||||||||| |||||||| || || | | ||||| ||| Sbjct 4992 AAACCGGGGCACTTATGTGGGCACATCAAAGACCAGTCGCCGTCGGCTTCCACTCGCTTC 5051 Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071 || || ||||| || |||||||||||| || | ||| || | ||| | || || ||| Sbjct 5052 ATGAACAGATCGGGAATCCATAGAGCATAGAACAAATCGCGAGCTCTGTTCTCCTCCTTT 5111 Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131 || || ||||| || | ||| | ||||| | || || |||||||| || || | || Sbjct 5112 CCGGTGTTCTTCTTCAAATCCAAGAACTCAAAGATGTCCGAATGCCAGGGCTCCAAGTAA 5171 Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191 || || | | || ||||| || ||||| || || | ||| | ||| ||| || Sbjct 5172 ATGGCGAAGGCACCTGGTCGCTTGCCGCCTCCTTGGTCGACATACCGAGCGACGTTGTTG 5231 Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATA 78245 | |||||| |||||||| || ||||| || || || |||||||||| |||| Sbjct 5232 AACCCTCTCAGCATTGGAACAAGGCCGTTTGAGGTACCGTTTGTTCCAGCAATA 5285 Score = 98.7 bits (108), Expect = 1e-15 Identities = 191/282 (68%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 78746 AAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGC 78805 |||| ||| |||||||||||||| | || || || | || | |||||| || | || Sbjct 6256 AAATGCTTTCTTTGTTTCCTTGTGCAAGTTGGAAACTACAATACGTGCAGCAAGCACCGC 6315 Query 78806 ATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTC 78865 ||| || | ||| ||||| | |||| ||| |||| || || ||| |||||||||| Sbjct 6316 ATAGTCCGCATGGCTAGTAGTTAAGCTGGCCGCTGTTTCGGCAGCCAAATTATCTAACTC 6375 Query 78866 TATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCGATTTTGACAGGATC 78925 || || || ||| | ||||| || ||| || |||| | ||| || || || Sbjct 6376 CTGGGTGGTTACTCCACTGTATAGACCACTAATTACCTTCAATGTGATCACCACGGGGTC 6435 Query 78926 TACAAACTCAGTGTTCAATCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAA 78985 || || || |||| | ||||| || | ||| || | ||||| |||||||| || Sbjct 6436 AACGAAGTCCATGTTGAGGCCATAGCACAGCTTTTGGATTCTCGATGTTATTTTATCCAA 6495 Query 78986 TATAACATTCTCCTTGCATCCATTTCGTTTAATAACGAACAT 79027 || | |||||||| ||||| ||||| | ||| |||| Sbjct 6496 ATGAATTTCCTCCTTGCGTCCATCGCGTTTGAAAACATACAT 6537 >seq25219 Length=1370 Score = 158 bits (174), Expect = 2e-33 Identities = 288/418 (69%), Gaps = 9/418 (2%) Strand=Plus/Minus Query 47976 TCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 48035 || || || ||||| |||||| ||| | ||| || |||||||| ||||| || || Sbjct 558 TCGGCTACAAATTCAATATATTGAGACATAAGTTCGCAGTTCATTCCGATAAGATTGACG 499 Query 48036 GGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT--CGATG 48093 || ||||| || || | || ||||| || || |||| || || | || || | ||| Sbjct 498 GGCAGAGCGTCTGTTAAGAATTCTTGCTCAATCTTGACTGCTTCAGCGATGATGTCTATG 439 Query 48094 TTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCAC 48153 | | ||||| |||||| | || |||||| || ||||| | ||| || || || | Sbjct 438 ATGCG--TTCCTTGCTTGGTTTCTGCACCAAATGCTTGAACATCAGACAAGCGAAGTCGC 381 Query 48154 AATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTC 48213 |||| || || || || | ||| | ||||| || ||||| ||||||||||| || | Sbjct 380 AATGGAGTCCCTCGTCGCGTGAAATCAGCTCGTTGGAGAATGTAAGACCGGGCATGAGAC 321 Query 48214 CACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGG 48273 | || || || ||||| || |||| ||||| || ||||| || ||||| || | Sbjct 320 CGCGCTTCTTCAGCCAGAAGATTGATGCGAAGCTGCCGCTGAAGAAAATCCCTTCAACTG 261 Query 48274 CCGCAAATGCGGTAAGTCTCTCTCCG----TAACTGGCTTCGTTGTGTATCCACCGTTGT 48329 | |||||||| | | | || ||| | | | ||| ||| | ||||| || Sbjct 260 CAGCAAATGCAATGATACGTTCACCGAAGTTTGCGGACTTGCTTGAG-ATCCATGCAAGT 202 Query 48330 GCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGT 48387 ||||| |||||||||||||| ||||| || | |||||| || ||||| || ||| ||| Sbjct 201 GCCCAGTCAGCCTTCTTCTTCACACATGGGAGTGTTTCAATTGCATTGAAAAGATAGT 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693399327501440