Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_031065.1 Length=159878 Score E Sequences producing significant alignments: (Bits) Value seq145875 102 8e-17 >seq145875 Length=1531 Score = 102 bits (112), Expect = 8e-17 Identities = 200/287 (70%), Gaps = 18/287 (6%) Strand=Plus/Minus Query 130221 TTACGCATAATGTGCGTGTAAGAACGAGAGTGAATCGTTTCAGAGAAAGTCCAAGTCTGG 130280 ||||| ||||| || || ||||| || ||||| || ||||| || || | ||| || | Sbjct 1358 TTACGAATAATATGGGTATAAGATCGCGAGTGGATAGTTTCTGAAAATGACCACGTTTCA 1299 Query 130281 TTCCAAGTATCTAA-TGACGGATCAGAAATCAAAGCAGAAAGAACTGCAGCAGGCG--CT 130337 |||||| || | | | | || ||||| |||| || | ||| || || || Sbjct 1298 ACCCAAGTTTCAAGCTCAGGTATT-GAAATTAAAGGG---AGCAATGCGACATTCGGACT 1243 Query 130338 -CGTCCTTGAATACTGTCTAAAAGAGACTGATATTTCAAGTTGTTAATAAAAATAttttt 130396 ||||||||||| || | | || |||||||| ||||| | |||||||||| ||| Sbjct 1242 GCGTCCTTGAATCGAATCCAGTAAAGTTTGATATTTTAAGTTACTGATAAAAATATGTTT 1183 Query 130397 ttGATGCTCTGGGAGTTTATCA-AATTGA---GCTC-TGTCAGTCATCAAGTTAACTTCT 130451 || ||| || || ||| | || ||| || | || ||| | ||| |||||| Sbjct 1182 TTCATGTTCAGGAAGTCCAGCATAATCGATTCGATCTTGTGAAATATC-----CACTTCT 1128 Query 130452 TCTGGCCGCCAGAAAAATGAAAGCTGCTTTTCAATCAGTTCTTCAAA 130498 ||||||||||| ||||| || | |||||||||||| |||| |||||| Sbjct 1127 TCTGGCCGCCAAAAAAAAGATAACTGCTTTTCAATTAGTTTTTCAAA 1081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510546892950080