Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq145812 84.2 3e-11 seq56520 84.2 3e-11 >seq145812 Length=1452 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 165787 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTGT 165845 |||||||| ||||||||||||| ||||||||||| || |||||||||||||| |||||| Sbjct 71 TAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAATCCTGT 13 >seq56520 Length=1483 Score = 84.2 bits (92), Expect = 3e-11 Identities = 101/132 (77%), Gaps = 8/132 (6%) Strand=Plus/Minus Query 165787 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTGTC 165846 |||||||||||| |||||| ||||||| |||||| ||||||||||||||| ||||| Sbjct 133 TAGCTCAGTTGGG-AGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTA 75 Query 165847 TGACCCGCCTTGCCCGCTTAACTCAG-CGGTAGAGTGTCT--CCTTTACACGGAGGGTGT 165903 | || | ||| | ||| ||||| |||||||| ||| | |||| | |||| || Sbjct 74 T--CCTCCATTGAGCCGTTAGCTCAGCCGGTAGAGCATCTGACTTTTAATCAGAGG--GT 19 Query 165904 CGGCGGTTCGAA 165915 |||| ||||||| Sbjct 18 CGGCAGTTCGAA 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620933597447520