Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_031928.1 Length=169936 Score E Sequences producing significant alignments: (Bits) Value seq145875 104 3e-17 >seq145875 Length=1531 Score = 104 bits (114), Expect = 3e-17 Identities = 292/441 (66%), Gaps = 12/441 (3%) Strand=Plus/Minus Query 141592 GTCGTCGTAATAACGACCAATAGATTCAGCACGTTTCATAATAGCGTCATCTAACAGAAT 141651 ||| || ||||| | | | || | | |||||||| ||| || || | || ||| Sbjct 1452 GTCATCATAATAGCCAGCGATGTCTCCTGCACGTTTTTGAATTTCGGTATTTGTCACAAT 1393 Query 141652 TTCATCAAATACCTTTGACGGGTCTGTATAGAGGTTACGCATGATATGGGTATATGAACG 141711 |||||||| || | || || || | || |||||| || ||||||||||| || || Sbjct 1392 ATCATCAAAGACAATCGATGGATCATTGACGATGTTACGAATAATATGGGTATAAGATCG 1333 Query 141712 AGAGTGAATAGTCTCACTAAAGGTCCATGTAGCCACCCATGTATCAAGGCTAGGGTCTGA 141771 ||||| ||||| || ||| | ||| || | ||||| || ||||| ||| ||| Sbjct 1332 CGAGTGGATAGTTTCTGAAAATGACCACGTTTCAACCCAAGTTTCAAGCTCAGGTATTGA 1273 Query 141772 AATCAAGGCTTGAAGTGCAGCAGAAGGAGCACGTCCTTGGATACTATCCAGAAGTGATTG 141831 ||| || | | | ||| || ||| |||||||| || |||||| | | ||| Sbjct 1272 AATTAAAGGGAGCAATGCGACATTCGGACTGCGTCCTTGAATCGAATCCAGTAAAGTTTG 1213 Query 141832 ATACTTCAGGTTATTGGTAAAAATATTTTGTTGGAATTGTGGAAGCTTATTA-AATTGAG 141890 ||| || | |||| || ||||||||| || || || ||||| | | ||| || Sbjct 1212 ATATTTTAAGTTACTGATAAAAATATGTTTTTCATGTTCAGGAAGTCCAGCATAATCGAT 1153 Query 141891 CAGCATCCATCATCAA--GTTGACTTCTTCTGGACGCCAGAAAAAACTCAACTGCTTTTC 141948 | ||| | | || | ||||||||||| ||||| |||||| ||||||||||| Sbjct 1152 TCG-ATC--TTGTGAAATATCCACTTCTTCTGGCCGCCAAAAAAAAGATAACTGCTTTTC 1096 Query 141949 ACAAAGCTCTTCGAATACTTTATGACGTTGGATATCATAACGAGCAA---TACCCAATCC 142005 | || | ||| || | || || ||| ||||||||| |||| || || || Sbjct 1095 AATTAGTTTTTCAAAAATTTCATATTTTTGTTGATCATAACGCGCAACATTAACCGAT-- 1038 Query 142006 TGAACCAAAGAACATCGGTTC 142026 || |||| ||||||||||| Sbjct 1037 TG-TCCAAGAAACATCGGTTC 1018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542673675375360