Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_031934.1 Length=168929 Score E Sequences producing significant alignments: (Bits) Value seq145875 82.4 8e-11 >seq145875 Length=1531 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 140727 CAGAATTTCATCAAATACCTTTGACGGGTCTGTATAGAGGTTACGCATGATATGGGTATA 140786 || ||| |||||||| || | || || || | || |||||| || ||||||||||| Sbjct 1398 CACAATATCATCAAAGACAATCGATGGATCATTGACGATGTTACGAATAATATGGGTATA 1339 Query 140787 TGAACGAGAGTGAATAGTCTCACTAAAGGTCCATGTAGCCACCCATGTATCAAGGCTAGG 140846 || || ||||| ||||| || ||| | ||| || | ||||| || ||||| ||| Sbjct 1338 AGATCGCGAGTGGATAGTTTCTGAAAATGACCACGTTTCAACCCAAGTTTCAAGCTCAGG 1279 Query 140847 GTCTGAAATCAAGGCTTGGAGTGCAGCAGAAGGAGCACGTCCCTGGATACTATCCAGAAG 140906 |||||| || | | | ||| || ||| ||||| || || |||||| | Sbjct 1278 TATTGAAATTAAAGGGAGCAATGCGACATTCGGACTGCGTCCTTGAATCGAATCCAGTAA 1219 Query 140907 TGATTGATACTTCAGGTTATTGGTAAAAATATTTTGTT 140944 | |||||| || | |||| || ||||||||| || || Sbjct 1218 AGTTTGATATTTTAAGTTACTGATAAAAATATGTTTTT 1181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539457164150240