Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq145836 187 5e-42 seq59601 98.7 2e-15 seq124133 89.7 1e-12 seq34142 89.7 1e-12 seq20420 89.7 1e-12 seq5336 89.7 1e-12 seq75 89.7 1e-12 >seq145836 Length=1476 Score = 187 bits (206), Expect = 5e-42 Identities = 341/489 (70%), Gaps = 14/489 (3%) Strand=Plus/Minus Query 301420 ATGCTTAAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACAT 301479 ||||| ||| | || ||||||||||| |||||||| || || ||||| || | ||| || Sbjct 1388 ATGCTAAAACTTGATCCCTATATCAATGTCGATCCTGGAACAATGAGTCCAATTCAGCAC 1329 Query 301480 GGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAA 301539 || ||||| || || || || |||||||| ||||| || | ||| | ||||||||||| Sbjct 1328 GGCGAAGTTTTTGTTACCGAAGATGGTGCAGAAACTGACTTAGATTTAGGGCACTACGAG 1269 Query 301540 CGTTTCACTTCATTAACC---CTTAAGCGTGAAAGTAATTTTACGACTGGCCAAGTTTAT 301596 ||||||| ||| |||| | | |||| | ||| |||||||| || | | ||||| Sbjct 1268 CGTTTCA-TTC--GAACCAAAATGACGCGTCGTAATAACTTTACGACAGGGCGAATTTAT 1212 Query 301597 TTAAAAGTTAT-CGAAAATGAACG-CGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTG 301654 | | | || | || ||| || || ||| || | ||| | || ||||| |||||| Sbjct 1211 TCAGATGTGCTGCGTAAA-GAGCGTCGAGGGGA-TTATTTGGGCGCAACGGTTCAAGTTA 1154 Query 301655 TTCCCCACATCACCGATGAAATCAAAAGAAGAATTCACATTGCGGCTGAAAAATCAGATA 301714 |||| ||||||||| ||| ||||||| | | || | | ||| || | ||| Sbjct 1153 TTCCACACATCACCAATGCAATCAAAGAACGTGTTATCGAAGGTGCTAAAGGCTTTGATG 1094 Query 301715 TACTTATTGGAGAAATTGGAGGAACGGTCGGAGATATCGAATCGCTTCCTTTTATAGAAG 301774 | ||||| || ||||| || || || || ||||| || ||| | || ||| |||||| Sbjct 1093 TTGCTATTGTTGAGATTGGTGGCACAGTTGGCGATATTGAGTCGTTACCGTTTTTAGAAG 1034 Query 301775 CGATTCGTCAACTCTCTCATGACGAAGGAACGGCCAATGTTC--TGTTCATTCATCTCGT 301832 | ||||| ||||| || ||| | || | | || | | ||||||| ||| | Sbjct 1033 CTATTCGACAACTTGCTGTTGATGTTGG--CCGTGAACATACGTTGTTCATGCATTTAAC 976 Query 301833 GCTCTTACCCTATATAGCGACTGCTGGTGAGTTGAAATCAAAGCCAGCACAGCATTCGGT 301892 | || || ||| |||| |||||||||| | ||| |||| ||| | |||||||| || Sbjct 975 CTTATTGCCTTATTTAGCCTCTGCTGGTGAAGTTAAAACAAAACCAACTCAGCATTCAGT 916 Query 301893 TAAAGAATT 301901 |||||| || Sbjct 915 TAAAGAGTT 907 >seq59601 Length=2262 Score = 98.7 bits (108), Expect = 2e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 282966 AAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACG 283025 || |||||||| ||||| || ||||| || || ||||| |||||||| ||||| || Sbjct 2260 AAAATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTAACA 2201 Query 283026 GTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTA 283085 | ||||| || || || | || || || || ||||| ||||| ||||| | |||||| Sbjct 2200 TTTTCGATGGTATCGGAGGGCTCCACCTCAAGGGTGATAGTCTTGCCCGTAAGGGTCTTA 2141 Query 283086 ACGAATATCTGCATTTT 283102 ||||| |||||||| || Sbjct 2140 ACGAAAATCTGCATCTT 2124 >seq124133 Length=1756 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 820 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 876 >seq34142 Length=1455 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 872 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 816 >seq20420 Length=11055 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 1673 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1729 >seq5336 Length=1527 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 899 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 955 >seq75 Length=1704 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 762 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1044778514860184