Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq967 113 5e-20 >seq967 Length=1612715 Score = 113 bits (124), Expect = 5e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGT 16090 ||||||||||| |||||||| |||||||| ||||| | | ||| || || ||||| | | Sbjct 653863 AATCTATCTGCAACAAATTCAATATATTGGCACATAAGTTTGCAGTTCATGCCTATCATT 653804 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 || || | ||||| ||||||||||| |||||| || || || |||||||| || Sbjct 653803 TCAACAGGCAAAGCTTCTGTTAAAAATTCTTGTTCAATTTTGACAGCATCTTTAATAATT 653744 Query 16151 TCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAG 16210 ||| |||| || ||| | || | | |||||| ||||||| ||| ||||| Sbjct 653743 GATGTGACTCGATCCGGAGGTGGTTTTTGTATAATGTGTTTGAACATTAAACATGCGAAA 653684 Query 16211 TCGCAATGTA 16220 |||||||||| Sbjct 653683 TCGCAATGTA 653674 Score = 100 bits (110), Expect = 3e-16 Identities = 120/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| || ||||||| |||| ||||||||||| |||| || || ||||| | ||| Sbjct 653242 ATATATGTGTCAATCAATAAAGAATACATTTCTGAATGTACATTTTCCATGGCAACTTGA 653183 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || ||||| || || || ||||| | || |||||||| ||||||||| | || Sbjct 653182 AAGCCATAAAAACAACGTGCCTCTGTTACCTGTACTTCTTGACTAAATCGTTCAACAAGA 653123 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATA 16634 || ||||| || || || ||| ||||||||||| || |||| Sbjct 653122 TTTTCATTAACTATTCCATCAGAAGCAGCAAAAAATGCTAATA 653080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510215062912520