Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09] 187,611 sequences; 596,278,454 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq5123 138 8e-28 >seq5123 Length=351926 Score = 138 bits (152), Expect = 8e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 || |||||| ||| || ||||| ||||| ||||||||||| ||||| || | |||||||| Sbjct 332384 CTATATATTTTGCACCAAAATGTCTCCATTGAAATCCATAAACAGGCCCTAAATCTCCTT 332325 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | || || || ||||||| ||||||||| | || | || ||||||||| Sbjct 332324 CTTCCCTATCTGTAAAACCAGAAGAATCTAAAAACACACGTGAGCTGTTTTCATCCCAAA 332265 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACA 102212 |||| | || | | || |||||| | || ||||| || |||||||| |||| Sbjct 332264 TGTGAATACCTTTTTCACTTAACTCTTTTGCATTTGTTGATCCCCTAATAAACCATAACA 332205 Query 102213 GTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261 |||||| ||||| |||||||||||||||| || || ||||| ||||| Sbjct 332204 ATTCTTCCACAACGCCTCTCCAAAATACTCGTTTTGTTGTTAATAGTGG 332156 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 101746 TAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGG 101805 || ||| || | ||| || | |||| ||||| ||| |||| ||||| |||||||| Sbjct 332751 TAAATTCGTAATATGTGCCAGCATGTGAGTTAGTAGACAATAAGATGCAATATTAAATGG 332692 Query 101806 CACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACA 101865 ||||| | |||||||| || ||||||||| |||||||| || | || | |||| Sbjct 332691 TACTCCAAGACCCATATCTGCACTTCTTTGATAAAGTTGACATGATAACTCTTTATCATT 332632 Query 101866 GACATAAAATTGACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924 |||||||||||| || ||| ||||| || || | |||||| | ||| || | Sbjct 332631 CACATAAAATTGA-ACAAGACAGTGACAGGGAGGTAGGGCCATTTGTGAAATATCAGCTG 332573 Query 101925 CATTCCAAGCACACATTAACATCCTTCTATC 101955 |||||| ||| ||||| || ||||| || Sbjct 332572 GATTCCATGCAGTCATTATAATTCTTCTGTC 332542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360425195857361