Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eufriesea_20mexicana_20[refseq_20GCF_5F001483705.1_202016-05-09]
187,611 sequences; 596,278,454 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq731 197 2e-45
seq967 131 2e-25
>seq731
Length=568950
Score = 197 bits (218), Expect = 2e-45
Identities = 210/275 (76%), Gaps = 4/275 (1%)
Strand=Plus/Plus
Query 53056 CTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 53115
||| ||||| ||| || | | ||||| |||||| || || |||||||| | |||||
Sbjct 414486 CTGGATAGAACCATTATTTGCTATAATTTCATTCTTCATATCCTCATTCCAAAGATTTCT 414545
Query 53116 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 53175
|| |||||| ||| | | ||| ||||| || | |||||| ||||| ||||| |||||
Sbjct 414546 TTCAGTTAAATCTCGCAACAAATGAGGATTTACGATTTGAAACTCTCCTGACAAAACTCT 414605
Query 53176 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 53235
| || ||||||||||||||||| ||||| | |||||||||||||||||||||||| ||
Sbjct 414606 TCTTGTATAAATATTACTGGTATATGGTTCTATAGACTCATTATTTCCCAAAATTTGTGC 414665
Query 53236 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG-- 53293
||| ||||| || ||||||||||| | | |||| ||||| || ||| ||||| |
Sbjct 414666 AGTAGATGCTGTTGGCATAGGTGCAATTAGTAAAGAATTTCGAATACC--ATGTTTAGCA 414723
Query 53294 ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 53328
||||| |||||| | || ||||| ||| | |||
Sbjct 414724 ATTTTTGCTTTTAATGTTTTCCAATCCCATAAATC 414758
Score = 120 bits (132), Expect = 4e-22
Identities = 220/315 (70%), Gaps = 8/315 (3%)
Strand=Plus/Plus
Query 54095 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 54154
|| |||||||| ||||||||||| | || | | |||||| | |||||| ||||| |
Sbjct 415895 TTACCTGTATTTTTTTTAAGATCTAAAAATTCAAAAATATCTGCATGCCATGGTTCTACA 415954
Query 54155 TATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 54214
||||| | | |||| || | ||| ||||| || ||||| | |||| || || |||
Sbjct 415955 TATATAGCAAATGCTCCTGGTCTTTTATTTCCACCTTGATCAACATATCGCGCTGTATTA 416014
Query 54215 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 54274
||||| ||||| | ||| ||||| | |||||| ||| ||||| || || || ||| |
Sbjct 416015 TTATATACTCTGATCATAGGAATCAAACCATTAGATACACCAAGTGTACC--AGCTATTG 416072
Query 54275 --CTTCCACTGGCACGAATATTA-CTAATTGATAGACCTATCCCCCCTGCCATTTTAGAG 54331
| || || || |||||| | || | | || || || || || ||| ||||
Sbjct 416073 GTGTACCTCTTGCTCGAATACAATGTACATTA-AGTCCAATACCACCAGCCGATTTACTA 416131
Query 54332 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA-TGTT 54390
|| | ||| || |||||| |||| ||| || || || || |||||||| || ||||
Sbjct 416132 ATAAGTGCACACTTTTTTAATGTATTATATATTCCTTCAATGCTATCATCTTCCATTGTT 416191
Query 54391 AAGTAGAAAACAGCT 54405
|| || |||||| ||
Sbjct 416192 AA-TAAAAAACAACT 416205
Score = 107 bits (118), Expect = 2e-18
Identities = 234/347 (67%), Gaps = 14/347 (4%)
Strand=Plus/Plus
Query 53550 TACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAA 53609
|||| |||||||||||| | ||| || | || || |||| ||| ||||||||||| |
Sbjct 415180 TACCCATAGGTCTATGTTTAAAATTTGATACTTTTGCCTCTGAAATCGGATAATAATTGA 415239
Query 53610 TATCTATAATTTTATTGAGGTTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGA 53666
|| |||| ||| | | || | | |||||| |||| | || || || ||
Sbjct 415240 CGTCGATAACTTTGTCTAAATTACGCGTAACAATT--TTTGTC-ACTTCTCGAAGCTTTT 415296
Query 53667 GAAAATCAAATTGTCCATCTAT-------TACAAACATGTTCAATGCAATAGATGCCAGA 53719
|||||||| || |||| ||| ||||||||| || | ||||| || || | |
Sbjct 415297 GAAAATCATAT-GTCCTATTATCAGAATTTACAAACATATTTACAGCAATTGAGGCTAAA 415355
Query 53720 TTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 53779
|| || || || | ||||| | | | ||| | || || ||||| || | |||||||
Sbjct 415356 TTGCACACTGCAATTTCATTTGGACTAGAATACTCTACAATTTCAGTACACAAATTACTA 415415
Query 53780 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 53839
|||||||| ||||| ||||||| ||||| || || || ||| ||||||||
Sbjct 415416 CACTTGATTGTTCCCAAATTTTTATGATTTGATTTACGATTGCAATGATCTTTATAAAGC 415475
Query 53840 ATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCA 53886
|| | || || || ||||||| |||| | | ||| ||| ||||
Sbjct 415476 ATATAAGGAGTTCCTGTTTCAACTTGGGCAACAAGAATAGCTGTCCA 415522
Score = 95.1 bits (104), Expect = 1e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 53950 TTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 54009
|||||| || || |||||||||| | | |||||| |||| | |||||||| ||
Sbjct 415648 TTCAAATTCATCGCCCCAAACATCATGTAGACCAGGAGATTCGTGTGGACACATTAAACT 415707
Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 54069
||| | | | | || | |||||||||||||| |||||||| ||||| | ||| |||
Sbjct 415708 CCATTTTTCATTATTCAAAACTCGTTTCATAAAAAGATCAGGTATCCATAAAGCATAAAA 415767
Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTC 54106
|| ||||| | ||||| ||| || || |||||| ||
Sbjct 415768 TAATTCTCTTGCTCTATTTTCTTCCTTACCTGTAGTC 415804
Score = 93.3 bits (102), Expect = 5e-14
Identities = 123/171 (72%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 53383 TCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGC 53442
|||| ||| || || |||| |||| || |||||| || ||||| || || ||||| ||
Sbjct 414934 TCCTTTATAGGTTTCATATGTACCTTTCTCCTCAGCAAGCTCACAGCTAGCTTCTAAAGC 414993
Query 53443 ACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAA 53502
|| |||||| | ||||| || |||| |||| || | ||||| || || |||||
Sbjct 414994 ACTGTAATATAACGTTTCAAATATCTGGATATTAAGCTTCTGTGCCTCTTCACTTTCAAA 415053
Query 53503 TGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACC 53553
|||||| | | || ||| || ||||| | |||||||| ||||||||
Sbjct 415054 TGGATATCGCATTAAAAGAAATGCATCTGCAAGACCTTGAACTCCAATACC 415104
Score = 91.5 bits (100), Expect = 2e-13
Identities = 182/269 (68%), Gaps = 8/269 (3%)
Strand=Plus/Plus
Query 54404 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 54463
||||||||||| || | |||| | ||| ||| | || ||||| || || |||||
Sbjct 416269 CTAGACATTTGTTGTTGTATAGTACATGCAGAAAAAAGTGTTGGAGATGCATGTGTAAAA 416328
Query 54464 CATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC----CCATTGATG 54519
| ||| || | | ||| || || || ||| || ||||| || |||| ||||
Sbjct 416329 TAACGTTCTGATAAAAAATTATAAGTTTCTATAACTCTTTCTATGTCTTCACCATGGATG 416388
Query 54520 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 54579
| ||||| || | ||||||||| || || ||||||||||| | || | |||
Sbjct 416389 ----GCAACTGCAACTCTCATTAACATATGTTGTGGTCTTTCAACAACTTTCCCATGTAT 416444
Query 54580 TTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 54639
||| || ||||| |||| | ||||| |||||||||||||| || |||||||
Sbjct 416445 TTTTAGTAAGTAACTCCTTTCAAGCGTTTTGAAACCAAAATAGTTATAGCTGAAGTCTCT 416504
Query 54640 TTCGTAAATAATAACTGAGTTGAGTTTAT 54668
|| ||||| || | ||||| | ||||
Sbjct 416505 ATCATAAATTATTGCAGAGTTTAACTTAT 416533
Score = 86.0 bits (94), Expect = 7e-12
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934
||||||| ||||||||||| ||| | ||| | || | |||||||| | ||
Sbjct 414212 TCCATCCATAAAAATGCATTGATGTCAATTTTTCTGTTGTTGGTTTAGCTATATGAACAT 414271
Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994
| | ||||| |||||| || || || || | ||||| |||||||||| ||| | |
Sbjct 414272 TTAATGATTGTGATTGATCTATAAATGCACCACGATCTGCTGCCATTTTTAAGATTATTT 414331
Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAA 53024
||||||| |||||||||| ||||||||||
Sbjct 414332 TTTGTGGTATTTCCCAAACTGTTTTATAAA 414361
>seq967
Length=1612715
Score = 131 bits (144), Expect = 2e-25
Identities = 104/125 (83%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 24621 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 24680
||||| | ||||||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct 652949 TTAGAGAGGTCCACTTCTTCCACTGTCCAAAAAGATGCCTCAGCTTTTTTATACATATTC 652890
Query 24681 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATT 24740
|| |||||| | ||||||| ||||||| |||||| ||| |||||||| | || | |
Sbjct 652889 CAAATGTCAGGCCATTGAATAGGAAAAACAACAAACCTACGTGGATTTTCTTTTAGTAAT 652830
Query 24741 GGTTC 24745
|||||
Sbjct 652829 GGTTC 652825
Score = 100 bits (110), Expect = 3e-16
Identities = 157/222 (71%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 23941 TTTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCA 24000
||| | | || ||||| || |||||||||||| ||||| || |||||| ||| |
Sbjct 653886 TTTGACAGCCTAATTCTATAAGCAATCTATCTGCAACAAATTCAATATATTGGCACATAA 653827
Query 24001 TTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAA 24060
|| || ||||| ||||| | || ||| || | ||| | || | ||||||||||||||
Sbjct 653826 GTTTGCAGTTCATGCCTATCATTTCAACAGGCAAAGCTTCTGTTAAAAATTCTTGTTCAA 653767
Query 24061 TAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGG--ATACAATAA 24118
| ||| || ||| | ||||| ||| | ||| || | ||||| | ||||
Sbjct 653766 TTTTGACAGCATCTTTAATAATTGATGTGACTCGATCCGGA---GGTGGTTTTTGTATAA 653710
Query 24119 -ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 24159
||||| ||||| ||||||||||||||||| |||| ||||
Sbjct 653709 TGTGTTTGAACATTAAACATGCGAAATCGCAATGTAACCCCT 653668
Score = 82.4 bits (90), Expect = 9e-11
Identities = 92/123 (75%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216
||||||||||| ||| | ||| || ||| || ||||| |||||||| || | || |
Sbjct 653559 CCTCGTCTCTAGAAATAAGTTCATTACTAAATGTAAGTCCTGGCATTAGACCTCTTTTCT 653500
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276
| ||||| ||||| | ||||| ||| ||||||||| |||||||| || ||||| |
Sbjct 653499 TTAGCCAGAATATAGCAGCAAAACTGCCACTAAAGAAAATACCTTCTACCGCAGCAAATG 653440
Query 24277 CAA 24279
|||
Sbjct 653439 CAA 653437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592329241211280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |